Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC099654.8-201ENST00000637757 681 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.54□□□□□ -1.84
PDLIM1O00151 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PDLIM1O00151 MTND5P28-201ENST00000438005 1594 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM1O00151 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM1O00151 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.54□□□□□ -1.84
PDLIM1O00151 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM1O00151 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PDLIM1O00151 MIR30E-201ENST00000362104 92 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 RNU1-85P-201ENST00000364127 164 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PDLIM1O00151 AL355379.1-201ENST00000405542 640 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC073264.1-201ENST00000411508 416 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC008280.1-201ENST00000418851 412 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM1O00151 AC245291.1-201ENST00000419501 328 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.53□□□□□ -1.84
PDLIM1O00151 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM1O00151 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM1O00151 AL158071.1-201ENST00000430315 461 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 TBCAP1-201ENST00000436520 327 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 FTH1P1-201ENST00000437933 532 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.53□□□□□ -1.84
PDLIM1O00151 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM1O00151 NPM1P13-201ENST00000452663 865 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.53□□□□□ -1.84
PDLIM1O00151 AC092754.2-201ENST00000463506 460 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC087879.1-201ENST00000474343 374 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.53□□□□□ -1.84
PDLIM1O00151 KCTD9P5-201ENST00000504141 1170 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM1O00151 RAC1P2-201ENST00000511164 579 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC010374.2-201ENST00000512933 535 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 RNA5SP179-201ENST00000517284 121 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM1O00151 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.53□□□□□ -1.84
PDLIM1O00151 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
PDLIM1O00151 AC118942.1-201ENST00000529674 1035 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM1O00151 YPEL5P3-201ENST00000547227 352 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC091516.1-201ENST00000549191 703 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM1O00151 AC084824.1-201ENST00000550917 1005 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM1O00151 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.53□□□□□ -1.84
PDLIM1O00151 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM1O00151 MTCYBP28-201ENST00000566728 1132 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.53□□□□□ -1.84
PDLIM1O00151 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM1O00151 AC004832.5-201ENST00000608677 401 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC105227.2-201ENST00000615075 605 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC022306.3-201ENST00000619930 550 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM1O00151 MTCO1P24-201ENST00000515438 1558 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 AC011978.2-201ENST00000569835 2054 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 MTND5P7-201ENST00000413558 1798 ntBASIC3.53□□□□□ -1.84
PDLIM1O00151 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDLIM1O00151 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDLIM1O00151 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
PDLIM1O00151 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
PDLIM1O00151 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.52□□□□□ -1.85
PDLIM1O00151 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM1O00151 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PDLIM1O00151 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM1O00151 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM1O00151 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PDLIM1O00151 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PDLIM1O00151 RNA5SP295-201ENST00000362655 121 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 RNA5SP383-201ENST00000362934 120 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 RNU6-1243P-201ENST00000364028 107 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM1O00151 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 SNORA57.1-201ENST00000391227 145 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AL031121.1-201ENST00000406553 254 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 MIR1193-201ENST00000408109 78 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 RNU4-6P-201ENST00000410804 122 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 RNU6-575P-201ENST00000411326 105 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 AC233981.1-201ENST00000423224 461 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 OR8F1P-201ENST00000425243 930 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AL691449.1-201ENST00000426570 421 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 RPP40P1-201ENST00000426762 456 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.52□□□□□ -1.85
PDLIM1O00151 HSFY7P-201ENST00000432672 318 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 NDUFB1P1-201ENST00000435191 180 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 HSFY8P-201ENST00000437934 318 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 SNORA71B-202ENST00000439232 272 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 PTGES3P1-201ENST00000439531 483 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 RPS26P56-201ENST00000444468 240 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 Z99714.1-201ENST00000450463 807 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 HSFY5P-201ENST00000453726 309 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 RPS26P21-201ENST00000475397 348 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 FCF1P3-201ENST00000496394 590 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AC078918.1-201ENST00000498515 228 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms