Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
PCDHGB1Q9Y5G3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 FAM35DP-201ENST00000323387 2712 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 HMGB1P5-201ENST00000255320 642 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 RNA5SP191-201ENST00000362585 102 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 RNU5D-1-201ENST00000363299 116 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 SNORA4.1-201ENST00000364263 144 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 SNORA62.2-201ENST00000364672 152 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 Y_RNA.311-201ENST00000365068 96 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL161909.1-201ENST00000397390 712 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL603766.1-201ENST00000407763 664 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 Z99497.1-201ENST00000421282 135 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL138785.1-201ENST00000425821 331 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 Z74696.2-201ENST00000436514 498 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC016831.4-201ENST00000438302 307 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 COX6CP2-201ENST00000444980 225 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 EPS15P1-201ENST00000448836 336 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 RPL5P32-201ENST00000454085 879 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 BX248409.1-201ENST00000455497 255 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC006517.1-201ENST00000480485 328 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 VPS26AP1-201ENST00000483197 979 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC104687.1-201ENST00000485829 412 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL035404.1-201ENST00000497982 568 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 MTND2P33-201ENST00000506452 1031 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL512347.1-201ENST00000566420 503 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC136624.4-201ENST00000573044 370 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 MTND1P15-201ENST00000579262 949 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC020914.4-201ENST00000597690 277 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC079089.3-201ENST00000603094 673 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AL160290.3-201ENST00000604869 165 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 RBM11P1-201ENST00000604951 799 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC128687.1-201ENST00000605304 619 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 Z98200.1-201ENST00000607298 470 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC108747.1-201ENST00000609508 535 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC004825.2-201ENST00000616634 455 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 AC027287.1-201ENST00000553115 1453 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 CPHL1P-201ENST00000461341 3407 ntBASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHGB1Q9Y5G3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 AL031985.3-201ENST00000565390 2449 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 RN7SKP44-201ENST00000363602 316 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 RN7SKP227-201ENST00000364445 330 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 RNA5SP479-201ENST00000364858 117 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 RNU6-1283P-201ENST00000365314 105 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 MIR92A2-201ENST00000385299 75 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 ATP5F1P4-201ENST00000397288 746 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 TPT1P2-201ENST00000413105 503 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 OR51A3P-201ENST00000413596 924 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 AC092647.1-201ENST00000420654 287 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 CYP4F29P-201ENST00000420685 446 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 MTCYBP5-201ENST00000423752 1135 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 AC092641.1-201ENST00000440229 772 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 MTND4P18-201ENST00000447010 465 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 AC239367.2-201ENST00000447309 705 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 AC012671.1-201ENST00000451912 203 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 AC005229.2-201ENST00000456995 399 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 RPS7P7-201ENST00000463499 571 ntBASIC4.01□□□□□ -1.77
PCDHGB1Q9Y5G3 MTND1P16-201ENST00000465177 898 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms