Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGC4Q9Y5F7 AC091812.1-201ENST00000432235 1948 ntBASIC5.93□□□□□ -1.46
PCDHGC4Q9Y5F7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGC4Q9Y5F7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PCDHGC4Q9Y5F7 AC005225.5-201ENST00000623547 2225 ntBASIC5.93□□□□□ -1.46
PCDHGC4Q9Y5F7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AC005224.3-201ENST00000584683 2140 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 MFSD8-219ENST00000641228 2559 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 SNORD1C-201ENST00000363315 78 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 RNU6-179P-201ENST00000363350 107 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 RNA5SP500-201ENST00000364486 119 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 Y_RNA.428-201ENST00000384078 102 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 Y_RNA.473-201ENST00000384333 102 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 SNORA19-201ENST00000384737 128 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 RNU6-823P-201ENST00000391042 103 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AL035660.1-201ENST00000422041 222 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 MED28P3-201ENST00000444288 531 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 HSFY6P-201ENST00000445573 403 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AC108059.3-201ENST00000456388 214 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 TRBV26-201ENST00000456572 344 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 TRBV5-2-201ENST00000489095 273 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 SLC25A15P5-201ENST00000508033 253 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 RPS27AP18-201ENST00000515536 459 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 SNORD116.3-201ENST00000517176 78 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AC091078.2-201ENST00000557145 559 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AC004805.2-201ENST00000605382 482 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AC010424.2-201ENST00000607594 443 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 MIR6862-1-201ENST00000613016 70 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 MIR6862-2-201ENST00000614755 70 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 MIR6729-201ENST00000618194 65 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 MIR8062-201ENST00000621515 85 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AP000843.1-201ENST00000624880 701 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 CYP3A51P-201ENST00000633513 256 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 AC007159.1-201ENST00000566529 4706 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 HSPA8P14-201ENST00000552265 1805 ntBASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGC4Q9Y5F7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AP004607.3-201ENST00000530354 3915 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 Y_RNA.117-201ENST00000363294 101 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 RNU1-115P-201ENST00000365329 160 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 RHOT1P2-201ENST00000366423 333 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 MIR450B-201ENST00000401182 78 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 RNU6-1050P-201ENST00000410388 107 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 MRPL53P1-201ENST00000414323 319 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 RPL21P89-201ENST00000444021 467 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AP006222.1-205ENST00000450734 457 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 RPL21P93-201ENST00000480465 489 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AC021382.1-201ENST00000483523 359 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AC116337.1-201ENST00000509680 687 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 RNU2-10P-201ENST00000516375 211 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AC112191.2-201ENST00000522428 333 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AP000648.1-201ENST00000529682 397 ntBASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGC4Q9Y5F7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms