Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.78□□□□□ -1.64
PCDHB1Q9Y5F3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
PCDHB1Q9Y5F3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB1Q9Y5F3 AC104260.2-201ENST00000623551 3497 ntBASIC4.78□□□□□ -1.64
PCDHB1Q9Y5F3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PCDHB1Q9Y5F3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB1Q9Y5F3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 RN7SKP224-201ENST00000364140 325 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 RNU6-259P-201ENST00000383999 107 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 Y_RNA.516-201ENST00000384541 124 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 Y_RNA.582-201ENST00000391023 95 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 HMGB3P23-201ENST00000414981 585 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC004690.1-201ENST00000418216 328 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 RAD23BP1-201ENST00000421404 1227 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 RPL36AP10-201ENST00000421785 322 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 MTND4LP11-201ENST00000422184 280 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC008065.1-201ENST00000428525 348 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC004938.1-201ENST00000438468 308 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC244505.5-201ENST00000443639 207 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AURKAPS2-201ENST00000454983 333 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 ZFRP1-201ENST00000457579 2970 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC023424.2-201ENST00000493479 777 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC034222.1-201ENST00000494052 532 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 SNORD116-26-201ENST00000516006 96 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 OR5G4P-201ENST00000525251 760 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC136624.4-201ENST00000573044 370 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AL359999.1-201ENST00000604513 294 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AP002360.4-201ENST00000606980 481 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC103710.1-201ENST00000610003 901 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC138749.5-201ENST00000611461 208 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AP001506.1-201ENST00000615444 211 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 U6atac.1-201ENST00000616025 117 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC004009.2-201ENST00000623016 728 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AL160394.1-201ENST00000624765 724 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC099654.12-201ENST00000639868 649 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 TLK1P1-201ENST00000456760 2440 ntBASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB1Q9Y5F3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 ZNF652P1-201ENST00000442420 1309 ntBASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 AL161781.1-201ENST00000354277 403 ntBASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 Y_RNA.41-201ENST00000362646 102 ntBASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 RNA5SP479-201ENST00000364858 117 ntBASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 RN7SKP106-201ENST00000410832 272 ntBASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 E2F6P2-201ENST00000420708 748 ntBASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 OR4F13P-201ENST00000428478 931 ntBASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 NANOGP6-201ENST00000429190 847 ntBASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 OR2B7P-201ENST00000429302 934 ntBASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 MTATP6P13-201ENST00000438531 667 ntBASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHB1Q9Y5F3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms