Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC091179.1-201ENST00000461606 579 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC010285.1-201ENST00000470580 392 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 MTCO3P35-201ENST00000485582 781 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC020893.1-201ENST00000502452 580 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC112198.4-201ENST00000515450 351 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 snoZ278.1-201ENST00000517059 112 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC023632.1-201ENST00000518463 375 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 MED28P5-201ENST00000528254 438 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC087894.1-201ENST00000538359 518 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC023825.1-201ENST00000566704 1030 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AP003973.1-201ENST00000604639 691 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC099785.1-201ENST00000605697 437 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 SNORA62.6-201ENST00000606322 83 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC073073.2-201ENST00000609827 2578 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC114781.5-201ENST00000615297 108 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC100827.5-201ENST00000615883 426 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC006249.1-201ENST00000621223 471 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC026634.1-201ENST00000634369 198 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC007256.1-201ENST00000392253 2765 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AL513302.2-201ENST00000562313 1842 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC139713.2-214ENST00000642059 1811 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AL133264.1-201ENST00000407157 562 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 RNA5SP293-201ENST00000410527 113 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 OR8G2P-201ENST00000412796 908 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AL136133.1-201ENST00000413694 376 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AL139128.1-201ENST00000413921 941 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 CRYBB2P1-203ENST00000415709 538 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 RPS27AP7-201ENST00000422792 455 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 HSFY1P1-201ENST00000423928 1178 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC012498.1-201ENST00000424037 437 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 DPPA2P1-201ENST00000428060 556 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 RPL23AP69-201ENST00000431134 458 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AL772161.1-201ENST00000439130 476 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC127537.2-201ENST00000439258 465 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 RPS3AP46-201ENST00000448352 682 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 RPL21P104-201ENST00000464143 478 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 RN7SL442P-201ENST00000473804 320 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC105137.1-201ENST00000484355 562 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AL024509.2-201ENST00000493462 493 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC108078.3-201ENST00000502633 489 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC084024.2-201ENST00000503480 791 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 FABP5P12-201ENST00000515543 389 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC022695.1-201ENST00000522089 237 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AP001317.1-201ENST00000531194 960 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC016877.3-201ENST00000606778 504 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AC110801.1-201ENST00000623590 212 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 MTND2P41-201ENST00000637599 773 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 AL365440.1-201ENST00000436135 2167 ntBASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KCNIP3Q9Y2W7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KCNIP3Q9Y2W7 AC073429.2-201ENST00000569694 1444 ntBASIC3.04□□□□□ -1.92
KCNIP3Q9Y2W7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
KCNIP3Q9Y2W7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
KCNIP3Q9Y2W7 HMGB1P5-201ENST00000255320 642 ntBASIC3.04□□□□□ -1.92
KCNIP3Q9Y2W7 RNU1-75P-201ENST00000347264 129 ntBASIC3.04□□□□□ -1.92
KCNIP3Q9Y2W7 RNU6-1249P-201ENST00000363237 111 ntBASIC3.04□□□□□ -1.92
KCNIP3Q9Y2W7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms