Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AL592437.1-201ENST00000443781 492 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 NDUFA5P7-201ENST00000452914 242 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 PLGLA-201ENST00000465668 449 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AC078785.3-201ENST00000476607 425 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 RN7SL293P-201ENST00000481765 281 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 RAC1P2-201ENST00000511164 579 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 MTCO3P27-201ENST00000514397 196 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 OR5B10P-201ENST00000532869 642 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AC006960.3-201ENST00000561845 705 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 SNRPGP15-201ENST00000600149 222 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AL163642.2-201ENST00000604722 1019 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AL034351.1-201ENST00000605288 668 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AC005156.1-201ENST00000613371 573 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AC093875.1-201ENST00000623688 504 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AL355578.1-201ENST00000607405 1328 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 CEP170P1-201ENST00000502249 4587 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 RNVU1-3-201ENST00000364313 161 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 RNU6-921P-201ENST00000384361 107 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 Y_RNA.493-201ENST00000384422 102 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 MIR649-201ENST00000384843 97 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 MIR183-201ENST00000384958 110 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 RNA5SP424-201ENST00000390988 115 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 MCTS2P-201ENST00000394552 546 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 EIF5P1-201ENST00000400019 1231 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 MTCO2P31-201ENST00000402702 684 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AL355615.1-201ENST00000406187 641 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC245052.5-201ENST00000416320 649 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 USP9YP31-201ENST00000431405 881 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC073063.1-201ENST00000434352 607 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 CYCSP43-201ENST00000438233 310 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 SNORA71B-202ENST00000439232 272 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 RPS3AP12-201ENST00000443616 753 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC006480.1-201ENST00000449887 378 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 SNRPGP3-201ENST00000469405 227 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC092902.1-201ENST00000486999 259 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC118282.2-201ENST00000508739 374 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC074250.1-201ENST00000511117 192 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 HMGN1P15-201ENST00000513870 295 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 RN7SKP83-201ENST00000516512 178 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 MIR5047-201ENST00000579212 100 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC005412.1-201ENST00000580812 1049 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 ELOCP35-201ENST00000604289 336 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 IGHV3-29-201ENST00000604817 344 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 HMGB1P50-201ENST00000605814 607 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 SNORA62.6-201ENST00000606322 83 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC096577.2-201ENST00000611455 153 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC018926.1-201ENST00000616335 435 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 U6.105-201ENST00000637379 88 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 ZNF37BP-203ENST00000452306 1352 ntBASIC3.37□□□□□ -1.87
NPIPA1Q9UND3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
NPIPA1Q9UND3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA1Q9UND3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
NPIPA1Q9UND3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.36□□□□□ -1.87
NPIPA1Q9UND3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA1Q9UND3 USP8P1-201ENST00000494673 3183 ntBASIC3.36□□□□□ -1.87
NPIPA1Q9UND3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA1Q9UND3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms