Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC010680.3-201ENST00000604215 520 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC013553.2-201ENST00000604244 589 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC112487.2-201ENST00000637950 304 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 MTND5P17-201ENST00000418405 1603 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC004972.1-201ENST00000623934 2209 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 SNORA62.1-201ENST00000364287 154 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 Y_RNA.529-201ENST00000384586 119 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AL137014.1-201ENST00000420490 1226 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AL035660.1-201ENST00000422041 222 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC073465.2-201ENST00000440938 498 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 PCNPP2-201ENST00000441651 455 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 RPS29P15-201ENST00000458329 171 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC004453.1-201ENST00000487895 408 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 RPL7P23-201ENST00000493874 747 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC026427.2-201ENST00000506228 536 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 RNA5SP271-201ENST00000516700 88 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC243972.3-201ENST00000539655 198 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 MIR4458-201ENST00000578872 75 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 MIR4260-201ENST00000583107 67 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AL096712.1-201ENST00000614561 159 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC093591.2-201ENST00000565254 3843 ntBASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.53□□□□□ -1.52
VTI1BQ9UEU0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AL049555.1-201ENST00000562834 1933 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC092376.2-201ENST00000622621 4116 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC073343.1-201ENST00000328239 651 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RNU4-73P-201ENST00000363164 141 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RN7SKP224-201ENST00000364140 325 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RNU5E-6P-201ENST00000365574 115 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RNU6-356P-201ENST00000384140 107 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 SNORD37.1-201ENST00000390968 65 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 MIR1203-201ENST00000408812 85 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms