Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RPL7P52-201ENST00000449200 742 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 CYCSP35-201ENST00000451978 304 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 MTCO2P32-201ENST00000514865 403 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 HMGB1P23-201ENST00000518743 568 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AF279873.1-201ENST00000523393 313 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 NCAPGP2-201ENST00000557911 754 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AL845331.3-202ENST00000562856 261 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 MTATP6P25-201ENST00000574491 261 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 uc_338.25-201ENST00000613756 156 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 U73479.1-201ENST00000618062 168 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC015967.1-201ENST00000619893 476 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AL162233.1-201ENST00000620014 944 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC107081.3-201ENST00000612715 2034 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC110774.1-201ENST00000623567 2018 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 RNU6-335P-201ENST00000364563 113 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 ATP5F1P3-201ENST00000397213 657 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AL138880.1-201ENST00000405824 642 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 VTA1P1-201ENST00000414044 866 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC023128.2-201ENST00000420880 1223 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC069157.1-201ENST00000421749 137 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 RPL21P66-201ENST00000426566 466 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 MTND4LP14-201ENST00000429447 288 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 TXNP1-201ENST00000441872 371 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 RPL21P10-201ENST00000463521 490 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AP002812.1-201ENST00000495378 474 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 RPL7L1P13-201ENST00000511702 739 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 RN7SKP283-201ENST00000517197 270 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC068657.1-201ENST00000520807 306 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC008562.1-201ENST00000521763 330 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC011816.2-201ENST00000607089 556 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 AC100793.4-201ENST00000613683 429 ntBASIC3.19□□□□□ -1.9
TREX1Q9NSU2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TREX1Q9NSU2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 U3.6-201ENST00000363622 211 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 OR52E6-202ENST00000379946 954 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AL357075.1-201ENST00000404107 726 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 RNU2-17P-201ENST00000410290 190 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 RNU2-6P-201ENST00000411404 190 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 RPL32P35-201ENST00000415214 394 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 OR2AS1P-201ENST00000427827 319 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 MTND4LP7-201ENST00000431728 294 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 TRIM60P13-201ENST00000432350 1283 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 ZNF965P-201ENST00000432501 817 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 Z75741.1-201ENST00000446793 314 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC092685.1-201ENST00000447960 1243 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 SSXP4-201ENST00000451349 245 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 RPS4XP10-201ENST00000465034 731 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC091153.1-201ENST00000466297 402 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 RPL23AP44-201ENST00000482216 473 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC114967.1-201ENST00000504890 259 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 PHBP14-201ENST00000512887 367 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC011611.1-201ENST00000552179 197 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 CCDC58P3-201ENST00000590792 430 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AL591516.1-201ENST00000611326 274 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AL354976.1-201ENST00000613843 387 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.18□□□□□ -1.9
TREX1Q9NSU2 MIR7975-201ENST00000619350 68 ntBASIC3.18□□□□□ -1.9
TREX1Q9NSU2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms