Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 AC090877.1-201ENST00000561418 344 ntBASIC3.81□□□□□ -1.8
HPS4Q9NQG7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 BPTFP1-201ENST00000579209 492 ntBASIC3.81□□□□□ -1.8
HPS4Q9NQG7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 AL020997.3-201ENST00000602843 359 ntBASIC3.81□□□□□ -1.8
HPS4Q9NQG7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 AL137849.1-201ENST00000604767 169 ntBASIC3.81□□□□□ -1.8
HPS4Q9NQG7 AP004247.3-201ENST00000608682 624 ntBASIC3.81□□□□□ -1.8
HPS4Q9NQG7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.81□□□□□ -1.8
HPS4Q9NQG7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HPS4Q9NQG7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC069218.2-201ENST00000411665 344 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC069282.1-201ENST00000411911 526 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 OR51A3P-201ENST00000413596 924 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC007390.1-201ENST00000415722 356 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC073063.1-201ENST00000434352 607 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 RPS7P2-201ENST00000435134 607 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 NPM1P49-201ENST00000448027 714 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AL136097.1-201ENST00000456945 913 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 RPS15AP1-201ENST00000457423 391 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 SNORD105B-201ENST00000458770 79 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 NAP1L1P3-201ENST00000462291 880 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AL358832.1-201ENST00000497800 389 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC093755.1-201ENST00000512950 1023 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 SNORA70.24-201ENST00000517233 118 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 OR7E13P-201ENST00000526052 910 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 CYB5AP5-201ENST00000549779 389 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC023825.1-201ENST00000566704 1030 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC090616.5-202ENST00000582111 297 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC010591.1-201ENST00000603941 649 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AL442067.2-201ENST00000614033 363 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 U6.98-201ENST00000637157 84 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC006927.2-201ENST00000639256 389 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 BX649567.1-201ENST00000642071 1134 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HPS4Q9NQG7 AC002546.1-201ENST00000588041 2504 ntBASIC3.8□□□□□ -1.8
HPS4Q9NQG7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 MTND5P1-201ENST00000445440 1375 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 RNA5SP295-201ENST00000362655 121 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 RNU6-1243P-201ENST00000364028 107 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC092638.1-201ENST00000411966 1275 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 UBE2V1P9-201ENST00000414760 368 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC008280.1-201ENST00000418851 412 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 ARF4P2-201ENST00000430209 526 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC010881.1-201ENST00000433830 235 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC234064.1-201ENST00000436312 247 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC092641.1-201ENST00000440229 772 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC093801.2-201ENST00000503966 1050 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 HSPD1P15-201ENST00000505573 1122 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 RANP9-201ENST00000519957 271 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC068339.2-201ENST00000534395 618 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms