Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.59□□□□□ -1.99
KIAA1549Q9HCM3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 AC078785.3-201ENST00000476607 425 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 AL049830.2-201ENST00000480072 201 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 SRIP1-201ENST00000489235 288 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 AC118282.1-201ENST00000506408 765 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 AC119751.1-201ENST00000513357 765 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 RNA5SP367-201ENST00000516557 118 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 NRBF2P5-201ENST00000603087 788 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 AC016252.1-201ENST00000609721 474 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 U6.98-201ENST00000637157 84 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 AC005183.1-201ENST00000603687 1979 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.59□□□□□ -2
KIAA1549Q9HCM3 AC091152.2-201ENST00000591628 2569 ntBASIC2.59□□□□□ -2
KIAA1549Q9HCM3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 MIR449A-201ENST00000362113 91 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 RNU2-52P-201ENST00000410680 190 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 ARL5AP4-201ENST00000430731 512 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 GAPDHP27-201ENST00000447427 1020 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 RAB28P3-201ENST00000448325 597 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 OR5AK3P-201ENST00000527486 1297 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AP002404.1-201ENST00000532005 451 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 RNU1-112P-201ENST00000364401 164 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 USP9YP36-201ENST00000424581 829 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC009965.2-201ENST00000425328 970 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 RPL23AP4-201ENST00000427757 463 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC022018.1-201ENST00000430685 241 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 USP9YP31-201ENST00000431405 881 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC005002.1-201ENST00000447458 540 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AL109933.2-201ENST00000452651 260 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AP004217.1-201ENST00000480579 346 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC079600.2-201ENST00000550076 130 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.58□□□□□ -2
KIAA1549Q9HCM3 AC245100.7-201ENST00000609678 442 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 FRG1DP-201ENST00000635586 771 ntBASIC2.58□□□□□ -2
KIAA1549Q9HCM3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.57□□□□□ -2
KIAA1549Q9HCM3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
KIAA1549Q9HCM3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.57□□□□□ -2
KIAA1549Q9HCM3 RN7SKP222-201ENST00000410651 315 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.57□□□□□ -2
KIAA1549Q9HCM3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.57□□□□□ -2
KIAA1549Q9HCM3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.57□□□□□ -2
KIAA1549Q9HCM3 CBX1P4-201ENST00000439415 457 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 RNU6-1218P-201ENST00000458990 108 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 AC114982.2-201ENST00000461396 358 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 AC003982.1-202ENST00000469928 248 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 AC117522.3-201ENST00000507974 584 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 TXNP6-201ENST00000510190 310 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 AC005351.1-201ENST00000511152 786 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.57□□□□□ -2
KIAA1549Q9HCM3 H3F3AP1-201ENST00000559984 334 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.57□□□□□ -2
KIAA1549Q9HCM3 AL161912.3-201ENST00000605404 628 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 AL353743.4-201ENST00000422653 1547 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
KIAA1549Q9HCM3 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.57□□□□□ -2
KIAA1549Q9HCM3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 RPL31P1-201ENST00000398116 372 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 RPL21P40-201ENST00000428586 483 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AC087499.2-201ENST00000432861 149 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 CEACAMP4-201ENST00000457676 421 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 SNORD108-201ENST00000459332 71 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms