Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 SNORA7.2-201ENST00000364446 145 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 RNU5A-2P-201ENST00000384337 116 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 PSMA6P3-201ENST00000428242 164 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AL365396.1-201ENST00000430854 671 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 PHBP16-201ENST00000446318 950 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 MTCO3P16-201ENST00000454456 754 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 MTND2P28-201ENST00000457540 1044 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 MEMO1P3-201ENST00000459811 302 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 RNU6-27P-201ENST00000516146 107 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC012182.1-201ENST00000570133 895 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC010928.3-201ENST00000587712 541 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 VN1R92P-201ENST00000598511 928 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 SNRPGP15-201ENST00000600149 222 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AL596327.1-201ENST00000603629 213 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AL139286.1-201ENST00000604465 483 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC128687.1-201ENST00000605304 619 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC055876.5-201ENST00000605667 259 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC011816.2-201ENST00000607089 556 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AL357080.1-201ENST00000617394 239 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AL603755.1-201ENST00000619504 163 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 MIR7703-201ENST00000620784 77 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC053481.2-202ENST00000582394 1500 ntBASIC4.1□□□□□ -1.75
BRF2Q9HAW0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AL365440.1-201ENST00000436135 2167 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RNA5SP52-201ENST00000362448 134 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RNA5SP505-201ENST00000364748 108 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 MIR192-201ENST00000384915 110 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AL031679.1-201ENST00000400616 525 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RNU4-72P-201ENST00000410754 173 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC083875.1-201ENST00000419509 405 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AL391219.1-201ENST00000422570 483 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AL157831.1-201ENST00000426134 473 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RPL21P112-201ENST00000434403 463 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 UBE2D3P1-201ENST00000436669 444 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RPL23AP52-201ENST00000439311 478 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 Z95327.1-201ENST00000446082 482 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RAD23BP3-201ENST00000454157 1152 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RPS20P32-201ENST00000456044 356 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RNU7-136P-201ENST00000458819 69 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RN7SL585P-201ENST00000470538 280 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC072039.1-201ENST00000477611 581 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC017037.1-201ENST00000508460 471 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC093853.1-201ENST00000515689 483 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AP004371.1-201ENST00000525240 214 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC008088.1-201ENST00000580993 280 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC090616.2-202ENST00000584248 222 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AP000811.1-201ENST00000603803 651 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 DUXAP11-201ENST00000603858 526 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RNU6-88P-201ENST00000606801 100 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC026368.1-201ENST00000614934 690 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 MIR6730-201ENST00000622213 67 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC068057.2-201ENST00000624047 895 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC008785.1-201ENST00000624475 456 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BRF2Q9HAW0 Z98755.1-201ENST00000407015 1384 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AL157700.1-201ENST00000561973 1432 ntBASIC4.09□□□□□ -1.75
BRF2Q9HAW0 AC012618.3-205ENST00000637896 1496 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms