Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNU6-7-201ENST00000364784 107 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 RNU6-8-201ENST00000365467 107 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 HIGD1AP11-201ENST00000438361 280 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 AC093392.2-201ENST00000450682 337 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 RPS15AP1-201ENST00000457423 391 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 MTCYBP14-201ENST00000457471 715 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 RN7SL75P-201ENST00000461926 281 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 AC078918.1-201ENST00000498515 228 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 MIR5680-201ENST00000577577 84 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM4Q9C037 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM4Q9C037 AL355596.1-201ENST00000565399 3996 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 AC002546.1-201ENST00000588041 2504 ntBASIC3.3□□□□□ -1.88
TRIM4Q9C037 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM4Q9C037 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 MFSD8-233ENST00000641482 4860 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM4Q9C037 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM4Q9C037 FRG1CP-201ENST00000358464 769 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 MIR320B1-201ENST00000390209 79 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 RPL23AP47-201ENST00000408017 460 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 RPL31P45-201ENST00000419532 356 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 RPL23AP82-202ENST00000427528 469 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 PTP4A1P3-201ENST00000433661 420 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 RPL21P2-201ENST00000440049 481 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 AC147055.1-201ENST00000509261 750 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM4Q9C037 AC069209.1-201ENST00000619282 651 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 AC092159.4-201ENST00000624944 550 ntBASIC3.29□□□□□ -1.88
TRIM4Q9C037 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TRIM4Q9C037 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM4Q9C037 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM4Q9C037 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM4Q9C037 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM4Q9C037 FTLP6-201ENST00000355274 422 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 RNU6-673P-201ENST00000365084 104 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM4Q9C037 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM4Q9C037 RPL21P110-201ENST00000433345 446 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 RPL32P28-201ENST00000443577 397 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 AL357552.1-201ENST00000445254 415 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM4Q9C037 RSL24D1P3-201ENST00000449255 495 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 RPL36AP33-201ENST00000450395 310 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 OR6C72P-201ENST00000451403 892 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 AC004924.1-201ENST00000480160 781 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 RN7SL499P-201ENST00000481141 276 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 AC011825.1-201ENST00000484967 388 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 HMGB3P15-201ENST00000507326 574 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 SEC11B-201ENST00000518383 499 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 AC022884.3-201ENST00000579571 248 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 AC139769.3-201ENST00000618383 175 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 AP003355.3-201ENST00000623465 114 ntBASIC3.28□□□□□ -1.88
TRIM4Q9C037 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM4Q9C037 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM4Q9C037 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM4Q9C037 AL136164.4-201ENST00000625013 2135 ntBASIC3.28□□□□□ -1.89
TRIM4Q9C037 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
TRIM4Q9C037 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM4Q9C037 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM4Q9C037 AL139095.1-201ENST00000404326 391 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 NANOGNBP1-201ENST00000448444 480 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 S100A11P2-201ENST00000467589 312 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM4Q9C037 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms