Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 HMGB3P23-201ENST00000414981 585 ntBASIC4.19□□□□□ -1.74
SCAPERQ9BY12 TOMM20P4-201ENST00000427861 435 ntBASIC4.19□□□□□ -1.74
SCAPERQ9BY12 MTCO1P52-201ENST00000433928 531 ntBASIC4.19□□□□□ -1.74
SCAPERQ9BY12 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 VTA1P2-201ENST00000520205 911 ntBASIC4.19□□□□□ -1.74
SCAPERQ9BY12 EEF1A1P37-201ENST00000522748 715 ntBASIC4.19□□□□□ -1.74
SCAPERQ9BY12 AP002770.2-201ENST00000543613 532 ntBASIC4.19□□□□□ -1.74
SCAPERQ9BY12 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 AP000919.1-202ENST00000581139 1264 ntBASIC4.19□□□□□ -1.74
SCAPERQ9BY12 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 AC098826.3-201ENST00000603823 466 ntBASIC4.19□□□□□ -1.74
SCAPERQ9BY12 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.19□□□□□ -1.74
SCAPERQ9BY12 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCAPERQ9BY12 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.18□□□□□ -1.74
SCAPERQ9BY12 U8.2-201ENST00000363156 134 ntBASIC4.18□□□□□ -1.74
SCAPERQ9BY12 RNU6-328P-201ENST00000390887 106 ntBASIC4.18□□□□□ -1.74
SCAPERQ9BY12 RNA5SP274-201ENST00000410484 108 ntBASIC4.18□□□□□ -1.74
SCAPERQ9BY12 AL049610.1-201ENST00000423374 372 ntBASIC4.18□□□□□ -1.74
SCAPERQ9BY12 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.18□□□□□ -1.74
SCAPERQ9BY12 RPL23AP4-201ENST00000427757 463 ntBASIC4.18□□□□□ -1.74
SCAPERQ9BY12 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.18□□□□□ -1.74
SCAPERQ9BY12 CBX1P4-201ENST00000439415 457 ntBASIC4.18□□□□□ -1.74
SCAPERQ9BY12 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
SCAPERQ9BY12 OR9N1P-201ENST00000491296 333 ntBASIC4.18□□□□□ -1.74
SCAPERQ9BY12 AC008565.1-201ENST00000509046 885 ntBASIC4.18□□□□□ -1.74
SCAPERQ9BY12 AP000873.5-201ENST00000533906 236 ntBASIC4.18□□□□□ -1.74
SCAPERQ9BY12 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.18□□□□□ -1.74
SCAPERQ9BY12 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 RPS4XP7-201ENST00000406274 780 ntBASIC4.17□□□□□ -1.74
SCAPERQ9BY12 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.17□□□□□ -1.74
SCAPERQ9BY12 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.17□□□□□ -1.74
SCAPERQ9BY12 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 AP003499.2-201ENST00000624100 483 ntBASIC4.17□□□□□ -1.74
SCAPERQ9BY12 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCAPERQ9BY12 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 AL133412.1-201ENST00000380194 2992 ntBASIC4.16□□□□□ -1.74
SCAPERQ9BY12 AC108206.1-201ENST00000570186 4159 ntBASIC4.16□□□□□ -1.74
SCAPERQ9BY12 U3.6-201ENST00000363622 211 ntBASIC4.16□□□□□ -1.74
SCAPERQ9BY12 ATF1P1-201ENST00000406040 927 ntBASIC4.16□□□□□ -1.74
SCAPERQ9BY12 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 AC126121.1-201ENST00000482313 553 ntBASIC4.16□□□□□ -1.74
SCAPERQ9BY12 AC021146.5-201ENST00000503544 545 ntBASIC4.16□□□□□ -1.74
SCAPERQ9BY12 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 AC093331.1-201ENST00000521474 169 ntBASIC4.16□□□□□ -1.74
SCAPERQ9BY12 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCAPERQ9BY12 RNA5SP289-201ENST00000362332 137 ntBASIC4.15□□□□□ -1.74
SCAPERQ9BY12 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.15□□□□□ -1.74
SCAPERQ9BY12 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.15□□□□□ -1.74
SCAPERQ9BY12 AC090525.1-201ENST00000479116 478 ntBASIC4.15□□□□□ -1.74
SCAPERQ9BY12 AL049830.2-201ENST00000480072 201 ntBASIC4.15□□□□□ -1.74
SCAPERQ9BY12 RN7SL633P-201ENST00000488974 297 ntBASIC4.15□□□□□ -1.74
SCAPERQ9BY12 RPS29P21-201ENST00000496272 170 ntBASIC4.15□□□□□ -1.74
SCAPERQ9BY12 RPS27AP18-201ENST00000515536 459 ntBASIC4.15□□□□□ -1.74
SCAPERQ9BY12 UBTFL10-201ENST00000528532 562 ntBASIC4.15□□□□□ -1.74
SCAPERQ9BY12 DNAJC19P3-201ENST00000594491 331 ntBASIC4.15□□□□□ -1.74
SCAPERQ9BY12 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SCAPERQ9BY12 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SCAPERQ9BY12 SNORA46-201ENST00000384762 135 ntBASIC4.14□□□□□ -1.75
SCAPERQ9BY12 WASF1P1-201ENST00000447560 1131 ntBASIC4.14□□□□□ -1.75
SCAPERQ9BY12 AC096725.1-201ENST00000514266 313 ntBASIC4.14□□□□□ -1.75
SCAPERQ9BY12 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.14□□□□□ -1.75
SCAPERQ9BY12 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.14□□□□□ -1.75
SCAPERQ9BY12 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SCAPERQ9BY12 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCAPERQ9BY12 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCAPERQ9BY12 AL021368.2-201ENST00000606125 5352 ntBASIC4.14□□□□□ -1.75
SCAPERQ9BY12 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.14□□□□□ -1.75
SCAPERQ9BY12 CDC27P2-201ENST00000425026 1922 ntBASIC4.14□□□□□ -1.75
SCAPERQ9BY12 AC107081.3-201ENST00000612715 2034 ntBASIC4.14□□□□□ -1.75
SCAPERQ9BY12 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms