Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC010680.4-201ENST00000605334 543 ntBASIC4.46□□□□□ -1.7
IFT140Q96RY7 RMST_8.1-201ENST00000610287 165 ntBASIC4.46□□□□□ -1.7
IFT140Q96RY7 RNVU1-3-201ENST00000364313 161 ntBASIC4.45□□□□□ -1.7
IFT140Q96RY7 AC021146.1-201ENST00000511202 716 ntBASIC4.45□□□□□ -1.7
IFT140Q96RY7 PISRT1-201ENST00000626175 531 ntBASIC4.45□□□□□ -1.7
IFT140Q96RY7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
IFT140Q96RY7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
IFT140Q96RY7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
IFT140Q96RY7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
IFT140Q96RY7 OR4G1P-202ENST00000641173 1788 ntBASIC4.45□□□□□ -1.7
IFT140Q96RY7 MIR26A1-201ENST00000362205 77 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
IFT140Q96RY7 AL079342.1-201ENST00000401460 267 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 SETP10-201ENST00000424368 814 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 IPMKP1-201ENST00000425988 855 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 FAR1P1-201ENST00000427163 934 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 ISCA1P6-201ENST00000427740 390 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.44□□□□□ -1.7
IFT140Q96RY7 AC006539.3-201ENST00000454258 129 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.44□□□□□ -1.7
IFT140Q96RY7 MIR2114-201ENST00000516645 80 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.44□□□□□ -1.7
IFT140Q96RY7 YWHAZP1-201ENST00000556286 722 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.44□□□□□ -1.7
IFT140Q96RY7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.44□□□□□ -1.7
IFT140Q96RY7 AP000526.1-201ENST00000603308 1388 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 AC092593.1-201ENST00000515413 1815 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 AC006020.1-201ENST00000420179 1854 ntBASIC4.44□□□□□ -1.7
IFT140Q96RY7 SNORD114-1-201ENST00000362705 72 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.43□□□□□ -1.7
IFT140Q96RY7 AC006960.1-201ENST00000419980 153 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.43□□□□□ -1.7
IFT140Q96RY7 OR2AS1P-201ENST00000427827 319 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.43□□□□□ -1.7
IFT140Q96RY7 OR6K1P-201ENST00000456766 971 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 AC091544.1-201ENST00000484702 348 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.43□□□□□ -1.7
IFT140Q96RY7 RNA5SP458-201ENST00000516188 119 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.43□□□□□ -1.7
IFT140Q96RY7 AC074140.1-201ENST00000621617 208 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
IFT140Q96RY7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
IFT140Q96RY7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
IFT140Q96RY7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
IFT140Q96RY7 RNU1-75P-201ENST00000347264 129 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 SNORD62.1-201ENST00000362541 86 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 RNA5SP99-201ENST00000364020 114 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 SNORA68.2-201ENST00000391263 128 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 RHEBP3-201ENST00000411920 351 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.43□□□□□ -1.7
IFT140Q96RY7 RPL23AP31-201ENST00000456160 467 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.43□□□□□ -1.7
IFT140Q96RY7 IGKV2D-23-201ENST00000518179 286 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 MIR1273D-201ENST00000577266 86 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.43□□□□□ -1.7
IFT140Q96RY7 AL137072.1-201ENST00000603444 466 ntBASIC4.43□□□□□ -1.7
IFT140Q96RY7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
IFT140Q96RY7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.42□□□□□ -1.7
IFT140Q96RY7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
IFT140Q96RY7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.42□□□□□ -1.7
IFT140Q96RY7 FCF1P1-201ENST00000432690 571 ntBASIC4.42□□□□□ -1.7
IFT140Q96RY7 AC133134.1-201ENST00000466800 359 ntBASIC4.42□□□□□ -1.7
IFT140Q96RY7 RPL21P99-201ENST00000480369 423 ntBASIC4.42□□□□□ -1.7
IFT140Q96RY7 OR5H3P-201ENST00000502817 919 ntBASIC4.42□□□□□ -1.7
IFT140Q96RY7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.42□□□□□ -1.7
IFT140Q96RY7 AP001005.3-201ENST00000622049 129 ntBASIC4.42□□□□□ -1.7
IFT140Q96RY7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
IFT140Q96RY7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.41□□□□□ -1.7
IFT140Q96RY7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
IFT140Q96RY7 EI24P2-201ENST00000397776 1076 ntBASIC4.41□□□□□ -1.7
IFT140Q96RY7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
IFT140Q96RY7 AL365396.1-201ENST00000430854 671 ntBASIC4.41□□□□□ -1.7
IFT140Q96RY7 OR2B8P-201ENST00000432841 938 ntBASIC4.41□□□□□ -1.7
IFT140Q96RY7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.41□□□□□ -1.7
IFT140Q96RY7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
IFT140Q96RY7 FAM172BP-201ENST00000487497 1089 ntBASIC4.41□□□□□ -1.7
IFT140Q96RY7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.41□□□□□ -1.7
IFT140Q96RY7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.41□□□□□ -1.7
IFT140Q96RY7 AP000919.1-202ENST00000581139 1264 ntBASIC4.41□□□□□ -1.7
IFT140Q96RY7 AC007938.3-201ENST00000604965 623 ntBASIC4.41□□□□□ -1.7
IFT140Q96RY7 AL355493.4-201ENST00000618530 292 ntBASIC4.41□□□□□ -1.7
IFT140Q96RY7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
IFT140Q96RY7 AC009039.2-201ENST00000624524 529 ntBASIC4.41□□□□□ -1.7
IFT140Q96RY7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
IFT140Q96RY7 AC008264.2-201ENST00000610193 3731 ntBASIC4.41□□□□□ -1.7
IFT140Q96RY7 DDX18P3-201ENST00000404856 2007 ntBASIC4.4□□□□□ -1.7
IFT140Q96RY7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.4□□□□□ -1.7
IFT140Q96RY7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.4□□□□□ -1.7
IFT140Q96RY7 RPL21P132-201ENST00000331267 462 ntBASIC4.4□□□□□ -1.71
IFT140Q96RY7 RNU1-35P-201ENST00000362782 153 ntBASIC4.4□□□□□ -1.71
IFT140Q96RY7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.4□□□□□ -1.71
IFT140Q96RY7 AL391156.1-201ENST00000554965 554 ntBASIC4.4□□□□□ -1.71
IFT140Q96RY7 AC010928.3-201ENST00000587712 541 ntBASIC4.4□□□□□ -1.71
IFT140Q96RY7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
IFT140Q96RY7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC4.4□□□□□ -1.71
IFT140Q96RY7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.4□□□□□ -1.71
IFT140Q96RY7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.39□□□□□ -1.71
IFT140Q96RY7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.39□□□□□ -1.71
IFT140Q96RY7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
IFT140Q96RY7 RNU6-76P-201ENST00000384060 104 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms