Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC092017.2-201ENST00000427600 362 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC006512.1-201ENST00000468816 291 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 RPL23AP40-201ENST00000487630 390 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC009120.1-201ENST00000493458 473 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 RPS4XP18-201ENST00000495480 763 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 RNU6-1212P-201ENST00000517023 104 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 IGHV3-63-201ENST00000518422 341 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 MYL12AP1-201ENST00000518490 515 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC090572.1-201ENST00000519251 160 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC022616.3-201ENST00000523940 148 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AP002770.2-201ENST00000543613 532 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 SETP7-201ENST00000552169 453 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 TXNP4-201ENST00000575018 310 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AP001029.3-201ENST00000588063 596 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 BX664608.1-201ENST00000610519 487 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC091812.1-201ENST00000432235 1948 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AC003985.2-201ENST00000562268 1669 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 RNA5SP319-201ENST00000362768 119 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 Y_RNA.478-201ENST00000384358 107 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 RNU6-1093P-201ENST00000391194 107 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 RPS15AP10-201ENST00000432472 382 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 BX248409.1-201ENST00000455497 255 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 RPL37P3-201ENST00000456825 293 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AC108161.1-201ENST00000461060 402 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AC072052.1-201ENST00000496556 306 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AC004062.1-201ENST00000509926 645 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 RNU6-699P-201ENST00000517081 110 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 OR5M2P-201ENST00000529003 936 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 HMGB3P26-201ENST00000560051 582 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AC096996.1-201ENST00000563813 325 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AC009779.6-201ENST00000603972 165 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AC104763.2-201ENST00000604179 382 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 AC073657.2-201ENST00000605661 303 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 uc_338.26-201ENST00000612659 160 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 KPNA2P1-201ENST00000458289 1591 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 CDY11P-201ENST00000447168 1651 ntBASIC6.68□□□□□ -1.34
TRIM47Q96LD4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM47Q96LD4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM47Q96LD4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM47Q96LD4 AC023421.1-201ENST00000590535 1785 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
TRIM47Q96LD4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM47Q96LD4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM47Q96LD4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM47Q96LD4 AL049780.3-201ENST00000624612 1583 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM47Q96LD4 RNA5SP183-201ENST00000362452 119 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 RNU6-582P-201ENST00000362989 107 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 Y_RNA.222-201ENST00000364264 102 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM47Q96LD4 SNORA56-201ENST00000383966 129 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 RNU6-606P-201ENST00000384721 111 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 ARF4P3-201ENST00000397387 509 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 RPL21P1-201ENST00000399532 476 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 AC099677.3-201ENST00000427081 395 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 RPL7L1P9-201ENST00000431298 745 ntBASIC6.67□□□□□ -1.34
TRIM47Q96LD4 AL133396.1-201ENST00000432048 687 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms