Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 RNU1-15P-201ENST00000353977 144 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 RNU6-462P-201ENST00000362659 105 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 MIR3065-201ENST00000390137 79 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 HMGB1P17-201ENST00000403495 628 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 RN7SKP182-201ENST00000410772 298 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 RPL31P2-201ENST00000413849 377 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC098826.1-201ENST00000433943 471 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 KCTD10P1-201ENST00000434203 625 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC114495.1-201ENST00000441274 436 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC009961.3-201ENST00000449832 765 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 RPL37P6-202ENST00000464216 403 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 PLGLA-201ENST00000465668 449 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC010618.1-201ENST00000469924 477 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC112198.1-201ENST00000505369 1220 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 PGBD4P4-201ENST00000509673 613 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC006499.6-201ENST00000511169 607 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 SNORA31.9-201ENST00000516429 84 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 PHBP17-201ENST00000528576 541 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 CYCSP29-201ENST00000533731 318 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 PARP1P2-201ENST00000556806 195 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 HNRNPCP4-201ENST00000571636 900 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 MTND6P33-201ENST00000571794 183 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AL160290.3-201ENST00000604869 165 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC009318.4-201ENST00000620496 486 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 AC018816.2-201ENST00000621460 353 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 CYP3A51P-201ENST00000633513 256 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHMP4CQ96CF2 ZNF33CP-201ENST00000432492 2030 ntBASIC5.21□□□□□ -1.57
CHMP4CQ96CF2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHMP4CQ96CF2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 RNA5SP513-201ENST00000364648 118 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 RNA5SP479-201ENST00000364858 117 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 RNU6-723P-201ENST00000383973 107 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 EIF1P3-201ENST00000423841 334 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AL035410.1-201ENST00000427409 427 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 RPS29P17-201ENST00000430795 166 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 SNRPEP7-201ENST00000438350 220 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 GSTA7P-201ENST00000438425 448 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 MTND1P30-201ENST00000441241 901 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AC010469.1-201ENST00000463864 576 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 TMEM251P1-201ENST00000503717 318 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AC093767.1-201ENST00000504523 156 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AC117532.1-201ENST00000514638 323 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 RN7SKP234-201ENST00000517173 224 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AC104986.1-201ENST00000517978 436 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 IGLVIV-53-201ENST00000520107 367 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AC135279.1-201ENST00000543493 504 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 WISP1-OT1-201ENST00000602893 642 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AC025588.3-201ENST00000604182 274 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AL356596.1-201ENST00000624230 379 ntBASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP4CQ96CF2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 VN1R8P-201ENST00000407739 893 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms