Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
HPS3Q969F9 PABPC1P3-201ENST00000469174 459 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.92□□□□□ -1.62
HPS3Q969F9 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.92□□□□□ -1.62
HPS3Q969F9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.92□□□□□ -1.62
HPS3Q969F9 AC111000.3-201ENST00000508057 576 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.92□□□□□ -1.62
HPS3Q969F9 AC024589.1-201ENST00000512207 263 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AC116347.2-201ENST00000514912 523 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.92□□□□□ -1.62
HPS3Q969F9 AC060788.1-201ENST00000521318 469 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 OR5AN2P-201ENST00000534535 896 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.92□□□□□ -1.62
HPS3Q969F9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.92□□□□□ -1.62
HPS3Q969F9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.92□□□□□ -1.62
HPS3Q969F9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.92□□□□□ -1.62
HPS3Q969F9 AC069061.3-201ENST00000582254 823 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 SLC25A36P1-201ENST00000590111 465 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 RSL24D1P11-201ENST00000591045 491 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HPS3Q969F9 Z98200.1-201ENST00000607298 470 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AC091979.2-201ENST00000607514 214 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HPS3Q969F9 AC009878.1-201ENST00000621819 340 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.92□□□□□ -1.62
HPS3Q969F9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.92□□□□□ -1.62
HPS3Q969F9 PABPC1P9-201ENST00000426076 1612 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HPS3Q969F9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.92□□□□□ -1.62
HPS3Q969F9 ZNF33CP-201ENST00000432492 2030 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AC074029.4-201ENST00000624796 1859 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 Z73965.1-201ENST00000623412 2297 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HPS3Q969F9 AL022578.1-201ENST00000439330 1433 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AC092435.4-201ENST00000623012 4159 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AC008033.1-201ENST00000216407 1162 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AL121657.1-201ENST00000327215 531 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 RNU4-91P-201ENST00000364778 135 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 SNORA62-201ENST00000365493 153 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 RNU6-878P-201ENST00000384578 110 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 RNY3P10-201ENST00000384764 102 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 RNA5SP372-201ENST00000390836 115 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 RNU6-952P-201ENST00000391164 108 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AL583835.1-201ENST00000399570 407 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 TMSB10P2-201ENST00000416049 131 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 CYCSP10-201ENST00000417973 294 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AC012065.2-201ENST00000421295 375 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 RPS27AP14-201ENST00000422868 454 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 OR51AB1P-201ENST00000429046 620 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 PRELID3BP10-201ENST00000431957 584 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.91□□□□□ -1.62
HPS3Q969F9 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 MTND5P14-201ENST00000441481 1267 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 MTCO1P27-201ENST00000448269 226 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 AC091564.1-201ENST00000464563 479 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 RN7SL385P-201ENST00000468873 276 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AC022034.3-201ENST00000471393 478 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.91□□□□□ -1.62
HPS3Q969F9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.91□□□□□ -1.62
HPS3Q969F9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 AP004247.1-201ENST00000531556 1289 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.91□□□□□ -1.62
HPS3Q969F9 HMGB2P1-201ENST00000591146 634 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 RPL12P25-202ENST00000598100 674 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 BBIP1P1-201ENST00000602999 279 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AC025588.3-201ENST00000604182 274 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AC019193.2-201ENST00000610012 634 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 AL357080.1-201ENST00000617394 239 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 AC098679.4-201ENST00000624241 654 ntBASIC4.91□□□□□ -1.62
HPS3Q969F9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HPS3Q969F9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HPS3Q969F9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
HPS3Q969F9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.91□□□□□ -1.62
HPS3Q969F9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HPS3Q969F9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HPS3Q969F9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
HPS3Q969F9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.9□□□□□ -1.62
HPS3Q969F9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HPS3Q969F9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HPS3Q969F9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HPS3Q969F9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.9□□□□□ -1.62
HPS3Q969F9 OR4K15-201ENST00000305051 1216 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 RNU1-32P-201ENST00000363937 159 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 SNORD82-201ENST00000365530 70 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 RNU1-44P-201ENST00000384453 163 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 SNORD116-4-201ENST00000384733 96 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 MIR1250-201ENST00000408098 113 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 RPL17P12-201ENST00000413391 526 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms