Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC026616.1-201ENST00000523157 525 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3□□□□□ -1.93
SHROOM3Q8TF72 HMGB3P26-201ENST00000560051 582 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 BNIP3P7-201ENST00000605641 516 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 AL353743.4-201ENST00000422653 1547 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 MIR512-1-201ENST00000384913 84 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 RPL23AP4-201ENST00000427757 463 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 OR2AS1P-201ENST00000427827 319 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 AC073069.1-201ENST00000428657 441 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 MYL8P-204ENST00000431574 518 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 RPS6P12-201ENST00000432491 726 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 RN7SKP31-201ENST00000516354 278 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 AC010306.1-201ENST00000523223 1117 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 AC012213.4-201ENST00000606457 354 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 AC007318.2-201ENST00000620999 243 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 RNU4-23P-201ENST00000362839 140 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 RNU6-1331P-201ENST00000363658 106 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 RPL31P1-201ENST00000398116 372 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 RN7SKP58-201ENST00000411010 305 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 MTATP6P19-201ENST00000413797 659 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 AIMP1P1-201ENST00000418670 937 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 AP004217.1-201ENST00000480579 346 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 RPS27AP18-201ENST00000515536 459 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 NPM1P52-201ENST00000518264 846 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 AP003499.2-201ENST00000624100 483 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 OR5BR1P-201ENST00000524992 1330 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 AC007336.1-201ENST00000576365 3828 ntBASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHROOM3Q8TF72 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AL445528.1-201ENST00000426330 420 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 RPL21P40-201ENST00000428586 483 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 MTND3P4-201ENST00000453537 303 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 ATG10-AS1-201ENST00000504846 648 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC114781.4-201ENST00000513707 639 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AL512310.1-201ENST00000548639 172 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC007566.2-201ENST00000603642 413 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC006111.3-201ENST00000622137 383 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 CR382285.2-201ENST00000624662 1495 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 OR10AB1P-202ENST00000641219 1686 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 U3.12-201ENST00000364498 214 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AP000893.1-201ENST00000474462 794 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC021087.2-201ENST00000504656 1203 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC118282.1-201ENST00000506408 765 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC119751.1-201ENST00000513357 765 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC093331.1-201ENST00000521474 169 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 MIR3186-201ENST00000577404 85 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AC067838.1-201ENST00000606064 577 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 AL355493.4-201ENST00000618530 292 ntBASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM3Q8TF72 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 RNU6-362P-201ENST00000516736 90 ntBASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 AC079600.2-201ENST00000550076 130 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms