Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RNU6-877P-201ENST00000383868 107 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 Y_RNA.453-201ENST00000384223 109 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RNA5SP219-201ENST00000390940 113 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AL359715.1-201ENST00000404330 555 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 BTF3P7-201ENST00000407097 488 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RN7SKP151-201ENST00000410230 316 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RN7SKP8-201ENST00000411037 358 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC010086.2-201ENST00000428616 226 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 HMGB1P31-201ENST00000437242 427 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 FABP5P14-201ENST00000437273 393 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 CALM1P1-201ENST00000442082 433 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RPL12P44-201ENST00000442319 502 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AL671855.1-201ENST00000446875 1203 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AP000522.1-201ENST00000448070 121 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 MTND3P16-201ENST00000452205 344 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 DEFA10P-201ENST00000455014 288 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RBMY2EP-202ENST00000456360 940 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RPS18P13-201ENST00000461260 454 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 JPT1-205ENST00000470924 663 ntTSL 5 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC091982.1-202ENST00000473923 343 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 MED28P2-201ENST00000475771 317 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 MKRN1-211ENST00000480552 906 ntTSL 5 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC093824.1-201ENST00000508796 343 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 PPBPP1-201ENST00000510807 373 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC008525.2-201ENST00000511000 82 ntTSL 5 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RNU6-189P-201ENST00000516120 101 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AP005018.1-201ENST00000525475 301 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AP001803.1-201ENST00000525668 147 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 CYCSP27-201ENST00000527643 293 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC073916.1-201ENST00000545095 130 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 PCED1B-AS1-209ENST00000552269 673 ntTSL 2 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 PCNPP1-201ENST00000552501 511 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 MIR3135A-201ENST00000578460 77 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 MIR4539-201ENST00000579784 60 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC055811.3-201ENST00000584952 686 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 MIR3943-201ENST00000585069 100 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC020914.7-201ENST00000594477 545 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC245389.1-201ENST00000605141 529 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AL021997.1-201ENST00000605757 193 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 RNU6-91P-201ENST00000607774 107 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AL359854.1-201ENST00000614203 1594 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC074050.4-201ENST00000614576 533 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AL512652.1-201ENST00000619006 500 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AP005212.3-201ENST00000619964 528 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 AC119674.1-207ENST00000641355 633 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 OR4G1P-203ENST00000641984 1631 ntBASIC3.4□□□□□ -1.87
SVIPQ8NHG7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SVIPQ8NHG7 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC3.39□□□□□ -1.87
SVIPQ8NHG7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.39□□□□□ -1.87
SVIPQ8NHG7 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SVIPQ8NHG7 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SVIPQ8NHG7 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SVIPQ8NHG7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC3.39□□□□□ -1.87
SVIPQ8NHG7 RNU6-1303P-201ENST00000364841 107 ntBASIC3.39□□□□□ -1.87
SVIPQ8NHG7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.39□□□□□ -1.87
SVIPQ8NHG7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SVIPQ8NHG7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC3.39□□□□□ -1.87
SVIPQ8NHG7 NQO2-204ENST00000380454 851 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms