Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 RPL12P39-201ENST00000455456 496 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC103783.1-201ENST00000520506 373 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AL390726.5-202ENST00000564800 256 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC093838.1-201ENST00000613014 469 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC022106.2-201ENST00000620114 757 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AL645937.1-201ENST00000641739 1652 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AL139811.1-201ENST00000424779 2299 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 FRG1CP-201ENST00000358464 769 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 RN7SKP115-201ENST00000363177 317 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 RNU6-432P-201ENST00000384196 109 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 RNU2-9P-201ENST00000410194 145 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 RNA5SP56-201ENST00000410277 118 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 RNU6-516P-201ENST00000411381 104 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 CHIAP3-201ENST00000423668 1133 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC005517.2-201ENST00000424673 553 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 ATP5JP1-201ENST00000431631 322 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 NANOGP10-201ENST00000453325 895 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 RNU2-10P-201ENST00000516375 211 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AP001922.4-201ENST00000526967 290 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 CR383656.7-201ENST00000548164 174 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC034105.3-201ENST00000565294 442 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC015917.1-201ENST00000579654 510 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC006254.3-201ENST00000603353 884 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AL365204.3-201ENST00000612448 685 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC130324.3-201ENST00000614165 542 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AL603758.1-201ENST00000618654 241 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AL356585.4-201ENST00000623078 1229 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC144833.1-201ENST00000567953 4089 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 AC000374.1-201ENST00000434698 1745 ntBASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS4Q8IUM7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC026951.1-201ENST00000559530 2459 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 RNU6-837P-201ENST00000391056 108 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 RNU6-908P-201ENST00000410160 94 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 RNU6-373P-201ENST00000411247 98 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 RPS4XP20-201ENST00000505751 772 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC017037.2-201ENST00000513850 890 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 RNU7-51P-201ENST00000516560 62 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 OR5AN2P-201ENST00000534535 896 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms