Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC090337.1-201ENST00000579651 2074 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 Y_RNA.212-201ENST00000364177 102 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 Y_RNA.257-201ENST00000364596 102 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 SNORD3H-201ENST00000384486 214 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AL139397.2-201ENST00000404529 772 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 RPL37P18-201ENST00000411602 243 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AL591848.1-201ENST00000413092 322 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC092017.2-201ENST00000427600 362 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 EZH2P1-201ENST00000431167 291 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 RPL36AP6-201ENST00000435770 321 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC239809.1-201ENST00000450470 217 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AL353691.1-201ENST00000451332 387 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 GEMIN2P1-201ENST00000454246 752 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 RN7SL165P-201ENST00000477476 291 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 RPL7P43-201ENST00000478876 753 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 RNU6-976P-201ENST00000516086 111 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 RNU6-798P-201ENST00000516912 103 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC092470.1-201ENST00000546187 132 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 MIR3672-201ENST00000584290 82 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AF038458.1-201ENST00000588406 262 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC104662.1-201ENST00000604448 511 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AL157817.1-201ENST00000614264 790 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 AC104118.1-201ENST00000607625 1589 ntBASIC6.34□□□□□ -1.39
RNF135Q8IUD6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF135Q8IUD6 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
RNF135Q8IUD6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.34□□□□□ -1.4
RNF135Q8IUD6 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
RNF135Q8IUD6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
RNF135Q8IUD6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.34□□□□□ -1.4
RNF135Q8IUD6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.34□□□□□ -1.4
RNF135Q8IUD6 AC011978.2-201ENST00000569835 2054 ntBASIC6.34□□□□□ -1.4
RNF135Q8IUD6 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AP000756.2-201ENST00000624168 2567 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 Y_RNA.158-201ENST00000363651 101 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 Y_RNA.176-201ENST00000363815 109 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 SNORA70H-201ENST00000383910 135 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 SNORA70J-201ENST00000384182 135 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 Y_RNA.482-201ENST00000384377 111 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 MIR433-201ENST00000384837 93 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 RNU6-954P-201ENST00000411355 107 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC116036.1-201ENST00000412199 367 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 VDAC1P9-201ENST00000412766 841 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 CYP4F30P-202ENST00000420048 405 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC069213.2-201ENST00000420238 366 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 SKA2P1-201ENST00000425592 390 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC016696.1-201ENST00000446949 318 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC104164.1-201ENST00000460282 590 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 RN7SL809P-201ENST00000482040 297 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms