Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MIR4716-201ENST00000579628 84 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 MAGOH2P-202ENST00000584384 429 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC008507.1-201ENST00000587506 734 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 BNIP3P11-201ENST00000603878 563 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC091979.2-201ENST00000607514 214 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 PABPC1P9-201ENST00000426076 1612 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AL079343.1-201ENST00000572358 1771 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC114546.3-201ENST00000623582 1734 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AL121657.1-201ENST00000327215 531 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 RNU6-1243P-201ENST00000364028 107 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 RNU6-723P-201ENST00000383973 107 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC016769.3-201ENST00000396562 315 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 ARF4P3-201ENST00000397387 509 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AL023807.1-201ENST00000407932 359 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 RN7SKP142-201ENST00000411236 328 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 RPL7P30-201ENST00000420888 709 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 Z99497.1-201ENST00000421282 135 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 RAD23BP1-201ENST00000421404 1227 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 UBE2FP3-201ENST00000436366 524 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 MTATP6P13-201ENST00000438531 667 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC069285.2-201ENST00000440210 275 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 TRIM60P18-201ENST00000441518 828 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 RPS7P7-201ENST00000463499 571 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 RPL36AP41-201ENST00000493820 306 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 TMEM251P1-201ENST00000503717 318 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC006499.5-201ENST00000505037 514 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 MTCYBP41-201ENST00000528913 1123 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC087276.1-201ENST00000529659 480 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 ZNF705CP-201ENST00000530515 889 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC105129.1-201ENST00000560250 297 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC078899.5-201ENST00000612475 178 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AL445567.2-201ENST00000618935 498 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AL356121.2-201ENST00000624715 780 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AP000843.1-201ENST00000624880 701 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 U6.101-201ENST00000637707 76 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC068137.3-201ENST00000639191 341 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 AC073869.6-201ENST00000640656 341 ntBASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A4Q53GD3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AL450326.2-201ENST00000421913 1962 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 RNU6-777P-201ENST00000364265 104 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AL663109.1-201ENST00000411498 844 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC011933.1-201ENST00000413334 321 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 CYCSP46-201ENST00000423569 204 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 RPS12P10-201ENST00000427031 377 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 UBE2V1P3-201ENST00000439651 417 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AL359073.1-201ENST00000448036 403 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC116533.1-201ENST00000459748 321 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 APOOP2-201ENST00000461561 539 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms