Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MTCO3P31-201ENST00000405526 789 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 RN7SKP222-201ENST00000410651 315 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AC007390.1-201ENST00000415722 356 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 DUTP6-201ENST00000425573 462 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 RPL23AP4-201ENST00000427757 463 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AL592437.1-201ENST00000443781 492 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 NIPA2P5-201ENST00000452282 464 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AL035404.1-201ENST00000497982 568 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 HMGB1P3-201ENST00000502802 616 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 SNX5P1-201ENST00000505757 1041 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 RNA5SP367-201ENST00000516557 118 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 HIGD1AP10-201ENST00000527837 282 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AC087276.1-201ENST00000529659 480 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AL389895.1-201ENST00000554127 252 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AC007687.1-201ENST00000602704 304 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AC013412.1-201ENST00000610687 192 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 U6.98-201ENST00000637157 84 ntBASIC3.5□□□□□ -1.85
RFX7Q2KHR2 AC091152.2-201ENST00000591628 2569 ntBASIC3.49□□□□□ -1.85
RFX7Q2KHR2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 AL049610.1-201ENST00000423374 372 ntBASIC3.49□□□□□ -1.85
RFX7Q2KHR2 RPS24P13-201ENST00000442520 397 ntBASIC3.49□□□□□ -1.85
RFX7Q2KHR2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 AC108938.1-201ENST00000451204 136 ntBASIC3.49□□□□□ -1.85
RFX7Q2KHR2 RPL21P41-201ENST00000459863 264 ntBASIC3.49□□□□□ -1.85
RFX7Q2KHR2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 RPL12P22-201ENST00000519073 490 ntBASIC3.49□□□□□ -1.85
RFX7Q2KHR2 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 MTND5P21-201ENST00000531961 522 ntBASIC3.49□□□□□ -1.85
RFX7Q2KHR2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.49□□□□□ -1.85
RFX7Q2KHR2 VN1R90P-201ENST00000595717 726 ntBASIC3.49□□□□□ -1.85
RFX7Q2KHR2 AC022509.4-201ENST00000621404 572 ntBASIC3.49□□□□□ -1.85
RFX7Q2KHR2 AC008264.2-201ENST00000610193 3731 ntBASIC3.48□□□□□ -1.85
RFX7Q2KHR2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
RFX7Q2KHR2 AC138915.3-201ENST00000562908 1389 ntBASIC3.48□□□□□ -1.85
RFX7Q2KHR2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
RFX7Q2KHR2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFX7Q2KHR2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RFX7Q2KHR2 MTCO1P52-201ENST00000433928 531 ntBASIC3.48□□□□□ -1.85
RFX7Q2KHR2 RPS29P6-201ENST00000438196 145 ntBASIC3.48□□□□□ -1.85
RFX7Q2KHR2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.48□□□□□ -1.85
RFX7Q2KHR2 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.48□□□□□ -1.85
RFX7Q2KHR2 HAUS1P1-201ENST00000505275 832 ntBASIC3.48□□□□□ -1.85
RFX7Q2KHR2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.48□□□□□ -1.85
RFX7Q2KHR2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.48□□□□□ -1.85
RFX7Q2KHR2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.48□□□□□ -1.85
RFX7Q2KHR2 AC004241.3-201ENST00000611728 517 ntBASIC3.48□□□□□ -1.85
RFX7Q2KHR2 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.48□□□□□ -1.85
RFX7Q2KHR2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RFX7Q2KHR2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 AC138393.1-206ENST00000540997 1886 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 FTLP6-201ENST00000355274 422 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 RNU1-35P-201ENST00000362782 153 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 OR13C3-201ENST00000374781 1108 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 AL109933.2-201ENST00000452651 260 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 AP000873.1-201ENST00000463987 400 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 ELOCP29-201ENST00000588193 334 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 AC090115.4-201ENST00000609970 188 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 MIR6715A-201ENST00000615929 79 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 AP003485.2-201ENST00000623636 610 ntBASIC3.47□□□□□ -1.85
RFX7Q2KHR2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RFX7Q2KHR2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.46□□□□□ -1.85
RFX7Q2KHR2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RFX7Q2KHR2 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RFX7Q2KHR2 GTF2H2B-203ENST00000508065 1432 ntBASIC3.46□□□□□ -1.86
RFX7Q2KHR2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
RFX7Q2KHR2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms