Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AL159987.1-201ENST00000347911 293 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 RNU1-43P-201ENST00000365052 165 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 SNORD116-11-201ENST00000383882 92 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 RNU6-338P-201ENST00000383888 105 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AL391417.1-201ENST00000404100 426 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC108032.1-201ENST00000416706 207 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 RPL17P36-201ENST00000420302 549 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC108075.1-201ENST00000424692 529 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 RPS6P12-201ENST00000432491 726 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 RPL7P28-201ENST00000437739 740 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 HMGB3P30-201ENST00000457863 606 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 HMGN1P9-201ENST00000515212 298 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC090136.1-201ENST00000520009 240 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC073916.1-201ENST00000545095 130 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC068446.3-201ENST00000555285 382 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC090312.1-201ENST00000580637 348 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC234771.5-201ENST00000600161 514 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC083809.1-201ENST00000615051 472 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC010378.1-201ENST00000619270 362 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AL606534.2-204ENST00000635008 178 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 PARP4P1-201ENST00000435945 2337 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 Y_RNA.276-201ENST00000364732 109 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 Y_RNA.404-201ENST00000383978 102 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 RNU6-190P-201ENST00000384154 102 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 SNORA51.8-201ENST00000384234 132 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 U3.36-201ENST00000408418 213 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 BX323014.1-201ENST00000412876 237 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 OR6C66P-201ENST00000414917 930 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 RAC1P3-201ENST00000416129 580 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC099677.3-201ENST00000427081 395 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AL663074.2-201ENST00000440621 479 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 NEFMP1-201ENST00000443423 1006 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 RNU7-180P-201ENST00000459240 63 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 RPS23P3-201ENST00000470993 430 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC023818.1-201ENST00000498379 384 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 RNU6-1334P-201ENST00000516032 105 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 RNU5B-3P-201ENST00000516601 115 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 RNA5SP337-201ENST00000517007 109 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 Y_RNA.715-201ENST00000517082 110 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 HSBP1P1-201ENST00000555205 166 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC024614.2-201ENST00000577584 372 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC012433.1-201ENST00000588916 398 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC073657.2-201ENST00000605661 303 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC009229.3-201ENST00000608056 282 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AL450226.2-201ENST00000622913 439 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC068870.3-201ENST00000625077 2536 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 BIN2P1-201ENST00000504996 1530 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC110716.2-201ENST00000563865 3945 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC090017.1-201ENST00000548612 1779 ntBASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
RSPO4Q2I0M5 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms