Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNU6-761P-201ENST00000384148 107 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 AL138885.1-201ENST00000405921 675 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 AL353692.2-201ENST00000407054 335 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 AL512504.1-201ENST00000415494 778 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXF1Q12946 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXF1Q12946 RPS24P8-201ENST00000431490 402 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 AL138799.3-201ENST00000438968 350 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 GAPDHP27-201ENST00000447427 1020 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXF1Q12946 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXF1Q12946 RN7SL633P-201ENST00000488974 297 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXF1Q12946 RNA5SP385-201ENST00000515947 110 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 RNU6-491P-201ENST00000516099 110 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXF1Q12946 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXF1Q12946 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXF1Q12946 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
FOXF1Q12946 AP002404.1-201ENST00000532005 451 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXF1Q12946 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
FOXF1Q12946 AL121603.1-201ENST00000553815 142 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 MIR4325-201ENST00000583049 90 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
FOXF1Q12946 AC138649.5-201ENST00000637456 137 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXF1Q12946 AC139713.2-210ENST00000641741 992 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 GABPAP-201ENST00000419271 1356 ntBASIC2.71□□□□□ -1.98
FOXF1Q12946 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXF1Q12946 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
FOXF1Q12946 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
FOXF1Q12946 DCAF13P3-201ENST00000561147 1334 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.7□□□□□ -1.98
FOXF1Q12946 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
FOXF1Q12946 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
FOXF1Q12946 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.7□□□□□ -1.98
FOXF1Q12946 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
FOXF1Q12946 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
FOXF1Q12946 RPL23AP57-201ENST00000332361 466 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
FOXF1Q12946 GSTA12P-201ENST00000402398 508 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 RN7SKP123-201ENST00000410732 291 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 RPL7P8-201ENST00000411964 730 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 RPL26P37-201ENST00000411983 438 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 AL356806.1-201ENST00000422524 916 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.7□□□□□ -1.98
FOXF1Q12946 RSL24D1P3-201ENST00000449255 495 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.7□□□□□ -1.98
FOXF1Q12946 SNORD108-201ENST00000459332 71 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 RN7SL75P-201ENST00000461926 281 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 RPL7P5-201ENST00000471472 736 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 MTND3P6-201ENST00000485242 339 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.7□□□□□ -1.98
FOXF1Q12946 RN7SKP82-201ENST00000516786 223 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 AC104997.1-201ENST00000519761 717 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.7□□□□□ -1.98
FOXF1Q12946 AC009268.1-201ENST00000561352 1203 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 MIR4506-201ENST00000584693 77 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 AC067852.4-201ENST00000590314 478 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.7□□□□□ -1.98
FOXF1Q12946 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.7□□□□□ -1.98
FOXF1Q12946 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.7□□□□□ -1.98
FOXF1Q12946 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.7□□□□□ -1.98
FOXF1Q12946 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
FOXF1Q12946 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.7□□□□□ -1.98
FOXF1Q12946 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
FOXF1Q12946 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
FOXF1Q12946 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
FOXF1Q12946 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
FOXF1Q12946 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.69□□□□□ -1.98
FOXF1Q12946 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
FOXF1Q12946 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.69□□□□□ -1.98
FOXF1Q12946 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
FOXF1Q12946 SNORA9-201ENST00000384215 133 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 SNORA11C-201ENST00000408532 129 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 MTND4P11-201ENST00000417020 1058 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.69□□□□□ -1.98
FOXF1Q12946 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.69□□□□□ -1.98
FOXF1Q12946 UBE2V2P3-201ENST00000433562 437 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.69□□□□□ -1.98
FOXF1Q12946 TPMTP4-201ENST00000450749 678 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.69□□□□□ -1.98
FOXF1Q12946 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.69□□□□□ -1.98
FOXF1Q12946 HMGB3P30-201ENST00000457863 606 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.69□□□□□ -1.98
FOXF1Q12946 RPL5P24-201ENST00000463742 885 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 RPS29P2-201ENST00000479278 136 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 RNU2-58P-201ENST00000516403 183 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 AC067904.2-201ENST00000517322 1283 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.69□□□□□ -1.98
FOXF1Q12946 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.69□□□□□ -1.98
FOXF1Q12946 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.69□□□□□ -1.98
FOXF1Q12946 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.69□□□□□ -1.98
FOXF1Q12946 OR5D17P-201ENST00000531492 978 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 H3F3AP1-201ENST00000559984 334 ntBASIC2.69□□□□□ -1.98
FOXF1Q12946 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.69□□□□□ -1.98
FOXF1Q12946 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.69□□□□□ -1.98
FOXF1Q12946 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 448 ms