Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDLBPQ00341 RNU6-1207P-201ENST00000384343 107 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HDLBPQ00341 AL049693.1-201ENST00000402760 611 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 MTND1P23-201ENST00000416931 372 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 USP9YP18-201ENST00000425912 695 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 AC016712.1-201ENST00000431088 378 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 IFNWP4-201ENST00000453148 294 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 RPL7P15-201ENST00000461190 712 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 RN7SL354P-201ENST00000469282 294 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.88□□□□□ -1.47
HDLBPQ00341 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.88□□□□□ -1.47
HDLBPQ00341 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 AC108078.1-201ENST00000508073 725 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 AC022616.6-201ENST00000520479 119 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 AC100784.1-201ENST00000522790 310 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.88□□□□□ -1.47
HDLBPQ00341 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.88□□□□□ -1.47
HDLBPQ00341 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 CCNG2P1-201ENST00000549521 1000 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 LSM3P2-201ENST00000551246 273 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.88□□□□□ -1.47
HDLBPQ00341 AC009852.2-201ENST00000567898 485 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 HMGN1P30-201ENST00000589286 268 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HDLBPQ00341 AC009159.1-201ENST00000618386 642 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.88□□□□□ -1.47
HDLBPQ00341 AC019206.1-201ENST00000621938 425 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 AC124864.2-201ENST00000624736 186 ntBASIC5.88□□□□□ -1.47
HDLBPQ00341 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HDLBPQ00341 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HDLBPQ00341 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDLBPQ00341 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HDLBPQ00341 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HDLBPQ00341 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HDLBPQ00341 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDLBPQ00341 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDLBPQ00341 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDLBPQ00341 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.87□□□□□ -1.47
HDLBPQ00341 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDLBPQ00341 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.87□□□□□ -1.47
HDLBPQ00341 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDLBPQ00341 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
HDLBPQ00341 U8.3-201ENST00000363321 132 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 SNORA62-201ENST00000365493 153 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 SNORA70F-201ENST00000384142 135 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 MT-TC-201ENST00000387405 66 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 RNA5SP332-201ENST00000391063 115 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 U3.30-201ENST00000391308 210 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.87□□□□□ -1.47
HDLBPQ00341 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.87□□□□□ -1.47
HDLBPQ00341 CYCSP10-201ENST00000417973 294 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 AC092017.2-201ENST00000427600 362 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.87□□□□□ -1.47
HDLBPQ00341 AC091390.1-201ENST00000433904 331 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 MTND6P18-201ENST00000439477 513 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 MTATP6P30-201ENST00000443540 664 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 AC000111.2-201ENST00000448200 210 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 AC010733.1-201ENST00000451515 401 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 snoU13.1-201ENST00000459157 104 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.87□□□□□ -1.47
HDLBPQ00341 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDLBPQ00341 HMGB1P29-201ENST00000505659 499 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 RN7SKP234-201ENST00000517173 224 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 AC134698.4-201ENST00000523451 826 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.87□□□□□ -1.47
HDLBPQ00341 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.87□□□□□ -1.47
HDLBPQ00341 AC124947.2-202ENST00000552735 133 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 AL161713.1-201ENST00000555538 145 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.87□□□□□ -1.47
HDLBPQ00341 AL133241.1-201ENST00000556832 487 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.87□□□□□ -1.47
HDLBPQ00341 MIR4284-201ENST00000578924 81 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.87□□□□□ -1.47
HDLBPQ00341 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.87□□□□□ -1.47
HDLBPQ00341 AC115621.1-201ENST00000604653 858 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDLBPQ00341 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDLBPQ00341 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.87□□□□□ -1.47
HDLBPQ00341 AL592437.2-201ENST00000421655 2434 ntBASIC5.87□□□□□ -1.47
HDLBPQ00341 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDLBPQ00341 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDLBPQ00341 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDLBPQ00341 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HDLBPQ00341 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
HDLBPQ00341 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HDLBPQ00341 DDX18P3-201ENST00000404856 2007 ntBASIC5.86□□□□□ -1.47
HDLBPQ00341 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HDLBPQ00341 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HDLBPQ00341 AC017104.4-201ENST00000636283 1592 ntBASIC5.86□□□□□ -1.47
HDLBPQ00341 AC126755.2-208ENST00000327792 462 ntBASIC5.86□□□□□ -1.47
HDLBPQ00341 AC138969.1-213ENST00000331436 462 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms