Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CDRT1-208ENST00000630868 794 ntBASIC5.13□□□□□ -1.59
YBX1P67809 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.13□□□□□ -1.59
YBX1P67809 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.13□□□□□ -1.59
YBX1P67809 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.13□□□□□ -1.59
YBX1P67809 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 MTND5P1-201ENST00000445440 1375 ntBASIC5.13□□□□□ -1.59
YBX1P67809 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.13□□□□□ -1.59
YBX1P67809 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
YBX1P67809 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
YBX1P67809 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
YBX1P67809 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
YBX1P67809 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
YBX1P67809 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.12□□□□□ -1.59
YBX1P67809 AC097063.1-201ENST00000426714 1797 ntBASIC5.12□□□□□ -1.59
YBX1P67809 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
YBX1P67809 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
YBX1P67809 RNU1-146P-201ENST00000364015 165 ntBASIC5.12□□□□□ -1.59
YBX1P67809 SNORA33.2-201ENST00000365413 134 ntBASIC5.12□□□□□ -1.59
YBX1P67809 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
YBX1P67809 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.12□□□□□ -1.59
YBX1P67809 TPMTP2-201ENST00000414372 726 ntBASIC5.12□□□□□ -1.59
YBX1P67809 AL807761.1-201ENST00000417622 171 ntBASIC5.12□□□□□ -1.59
YBX1P67809 RBMY2QP-201ENST00000429799 1147 ntBASIC5.12□□□□□ -1.59
YBX1P67809 RPL12P17-201ENST00000432393 498 ntBASIC5.12□□□□□ -1.59
YBX1P67809 AC119618.1-201ENST00000434191 222 ntBASIC5.12□□□□□ -1.59
YBX1P67809 GTF2IP13-201ENST00000438487 386 ntBASIC5.12□□□□□ -1.59
YBX1P67809 CBX1P4-201ENST00000439415 457 ntBASIC5.12□□□□□ -1.59
YBX1P67809 RPS15AP9-201ENST00000439856 381 ntBASIC5.12□□□□□ -1.59
YBX1P67809 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.12□□□□□ -1.59
YBX1P67809 AL645937.3-201ENST00000453647 936 ntBASIC5.12□□□□□ -1.59
YBX1P67809 Y_RNA.631-201ENST00000459607 101 ntBASIC5.12□□□□□ -1.59
YBX1P67809 RPL31P50-201ENST00000471002 296 ntBASIC5.12□□□□□ -1.59
YBX1P67809 AC233702.1-201ENST00000482905 502 ntBASIC5.12□□□□□ -1.59
YBX1P67809 UBA52P3-201ENST00000491303 382 ntBASIC5.12□□□□□ -1.59
YBX1P67809 AC098976.1-201ENST00000513014 541 ntBASIC5.12□□□□□ -1.59
YBX1P67809 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.12□□□□□ -1.59
YBX1P67809 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.12□□□□□ -1.59
YBX1P67809 RNU6-1314P-201ENST00000517139 104 ntBASIC5.12□□□□□ -1.59
YBX1P67809 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.12□□□□□ -1.59
YBX1P67809 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.12□□□□□ -1.59
YBX1P67809 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.12□□□□□ -1.59
YBX1P67809 AC069307.1-201ENST00000602820 447 ntBASIC5.12□□□□□ -1.59
YBX1P67809 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.12□□□□□ -1.59
YBX1P67809 BBIP1P1-201ENST00000602999 279 ntBASIC5.12□□□□□ -1.59
YBX1P67809 AC010591.1-201ENST00000603941 649 ntBASIC5.12□□□□□ -1.59
YBX1P67809 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.12□□□□□ -1.59
YBX1P67809 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.12□□□□□ -1.59
YBX1P67809 AL078596.1-201ENST00000624856 447 ntBASIC5.12□□□□□ -1.59
YBX1P67809 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.12□□□□□ -1.59
YBX1P67809 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
YBX1P67809 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
YBX1P67809 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
YBX1P67809 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.12□□□□□ -1.59
YBX1P67809 AC011493.1-201ENST00000596753 1632 ntBASIC5.12□□□□□ -1.59
YBX1P67809 OR4G1P-203ENST00000641984 1631 ntBASIC5.12□□□□□ -1.59
YBX1P67809 USP9YP4-201ENST00000424401 1745 ntBASIC5.11□□□□□ -1.59
YBX1P67809 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.11□□□□□ -1.59
YBX1P67809 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 OR5P1P-201ENST00000299512 925 ntBASIC5.11□□□□□ -1.59
YBX1P67809 RPL23AP57-201ENST00000332361 466 ntBASIC5.11□□□□□ -1.59
YBX1P67809 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 RNU6-984P-201ENST00000363236 109 ntBASIC5.11□□□□□ -1.59
YBX1P67809 RNY1P12-201ENST00000364251 105 ntBASIC5.11□□□□□ -1.59
YBX1P67809 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
YBX1P67809 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.11□□□□□ -1.59
YBX1P67809 DHFRP6-201ENST00000401776 268 ntBASIC5.11□□□□□ -1.59
YBX1P67809 RNU2-62P-201ENST00000410868 191 ntBASIC5.11□□□□□ -1.59
YBX1P67809 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.11□□□□□ -1.59
YBX1P67809 RPL37P18-201ENST00000411602 243 ntBASIC5.11□□□□□ -1.59
YBX1P67809 DPPA2P3-201ENST00000411853 655 ntBASIC5.11□□□□□ -1.59
YBX1P67809 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.11□□□□□ -1.59
YBX1P67809 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.11□□□□□ -1.59
YBX1P67809 AC234782.4-201ENST00000417646 1048 ntBASIC5.11□□□□□ -1.59
YBX1P67809 AL161631.1-201ENST00000417933 486 ntBASIC5.11□□□□□ -1.59
YBX1P67809 MTCO2P27-201ENST00000420740 428 ntBASIC5.11□□□□□ -1.59
YBX1P67809 UQCRBP1-201ENST00000421129 336 ntBASIC5.11□□□□□ -1.59
YBX1P67809 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.11□□□□□ -1.59
YBX1P67809 MTCO3P21-201ENST00000430791 643 ntBASIC5.11□□□□□ -1.59
YBX1P67809 AC010881.1-201ENST00000433830 235 ntBASIC5.11□□□□□ -1.59
YBX1P67809 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.11□□□□□ -1.59
YBX1P67809 RPS20P32-201ENST00000456044 356 ntBASIC5.11□□□□□ -1.59
YBX1P67809 PPP1R2P5-201ENST00000457256 603 ntBASIC5.11□□□□□ -1.59
YBX1P67809 RNU7-63P-201ENST00000459054 62 ntBASIC5.11□□□□□ -1.59
YBX1P67809 FTH1P2-201ENST00000466086 412 ntBASIC5.11□□□□□ -1.59
YBX1P67809 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.11□□□□□ -1.59
YBX1P67809 AC027575.1-201ENST00000481064 460 ntBASIC5.11□□□□□ -1.59
YBX1P67809 RPL7P39-201ENST00000481157 744 ntBASIC5.11□□□□□ -1.59
YBX1P67809 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
YBX1P67809 COX6CP8-201ENST00000522620 226 ntBASIC5.11□□□□□ -1.59
YBX1P67809 AC100784.1-201ENST00000522790 310 ntBASIC5.11□□□□□ -1.59
YBX1P67809 AC018442.3-201ENST00000523025 183 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms