Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH13P55290 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH13P55290 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH13P55290 FAM133CP-201ENST00000332869 704 ntBASIC3.88□□□□□ -1.79
CDH13P55290 RN7SKP44-201ENST00000363602 316 ntBASIC3.88□□□□□ -1.79
CDH13P55290 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.88□□□□□ -1.79
CDH13P55290 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH13P55290 OR5BE1P-201ENST00000425977 939 ntBASIC3.88□□□□□ -1.79
CDH13P55290 NIPA2P1-201ENST00000426223 976 ntBASIC3.88□□□□□ -1.79
CDH13P55290 AC006548.1-201ENST00000427470 102 ntBASIC3.88□□□□□ -1.79
CDH13P55290 DNAJC19P7-201ENST00000428811 344 ntBASIC3.88□□□□□ -1.79
CDH13P55290 RPL23AP74-201ENST00000437246 471 ntBASIC3.88□□□□□ -1.79
CDH13P55290 MTND4P6-201ENST00000438297 472 ntBASIC3.88□□□□□ -1.79
CDH13P55290 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH13P55290 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH13P55290 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH13P55290 RPS11P1-201ENST00000451072 473 ntBASIC3.88□□□□□ -1.79
CDH13P55290 RPL12P26-201ENST00000452430 487 ntBASIC3.88□□□□□ -1.79
CDH13P55290 TRGVB-201ENST00000453257 471 ntBASIC3.88□□□□□ -1.79
CDH13P55290 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CDH13P55290 RPL7P18-201ENST00000478965 734 ntBASIC3.88□□□□□ -1.79
CDH13P55290 RPS3AP6-201ENST00000484430 795 ntBASIC3.88□□□□□ -1.79
CDH13P55290 RPS27AP13-201ENST00000498403 237 ntBASIC3.88□□□□□ -1.79
CDH13P55290 AC108941.1-201ENST00000502853 530 ntBASIC3.88□□□□□ -1.79
CDH13P55290 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH13P55290 AC114981.1-201ENST00000503897 678 ntBASIC3.88□□□□□ -1.79
CDH13P55290 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH13P55290 RNU6-583P-201ENST00000516012 92 ntBASIC3.88□□□□□ -1.79
CDH13P55290 Vault.1-201ENST00000516474 102 ntBASIC3.88□□□□□ -1.79
CDH13P55290 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH13P55290 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH13P55290 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH13P55290 RFPL1S-203ENST00000539579 330 ntBASIC3.88□□□□□ -1.79
CDH13P55290 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH13P55290 AC107954.1-201ENST00000565906 727 ntBASIC3.88□□□□□ -1.79
CDH13P55290 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH13P55290 RN7SL600P-201ENST00000581811 299 ntBASIC3.88□□□□□ -1.79
CDH13P55290 AC090616.5-202ENST00000582111 297 ntBASIC3.88□□□□□ -1.79
CDH13P55290 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.88□□□□□ -1.79
CDH13P55290 AC004987.4-201ENST00000603383 338 ntBASIC3.88□□□□□ -1.79
CDH13P55290 ARF4P1-201ENST00000605447 541 ntBASIC3.88□□□□□ -1.79
CDH13P55290 MIR6868-201ENST00000611215 58 ntBASIC3.88□□□□□ -1.79
CDH13P55290 MIR8059-201ENST00000620427 81 ntBASIC3.88□□□□□ -1.79
CDH13P55290 CR381572.1-201ENST00000625098 102 ntBASIC3.88□□□□□ -1.79
CDH13P55290 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH13P55290 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH13P55290 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH13P55290 U6.101-201ENST00000637707 76 ntBASIC3.88□□□□□ -1.79
CDH13P55290 OR5BE1P-202ENST00000641168 1176 ntBASIC3.88□□□□□ -1.79
CDH13P55290 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH13P55290 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH13P55290 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH13P55290 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDH13P55290 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH13P55290 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CDH13P55290 NUP58P1-201ENST00000502546 1738 ntBASIC3.87□□□□□ -1.79
CDH13P55290 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH13P55290 UBE3AP2-201ENST00000429033 2259 ntBASIC3.87□□□□□ -1.79
CDH13P55290 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH13P55290 RNA5SP399-201ENST00000364003 117 ntBASIC3.87□□□□□ -1.79
CDH13P55290 SNORD82-201ENST00000365530 70 ntBASIC3.87□□□□□ -1.79
CDH13P55290 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH13P55290 SNRPEP2-201ENST00000397592 279 ntBASIC3.87□□□□□ -1.79
CDH13P55290 MIR1183-201ENST00000408856 89 ntBASIC3.87□□□□□ -1.79
CDH13P55290 RN7SKP33-201ENST00000410942 340 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AC012065.2-201ENST00000421295 375 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH13P55290 AC093698.1-201ENST00000423843 571 ntBASIC3.87□□□□□ -1.79
CDH13P55290 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH13P55290 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH13P55290 AC073143.1-201ENST00000436316 395 ntBASIC3.87□□□□□ -1.79
CDH13P55290 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDH13P55290 AC127537.2-201ENST00000439258 465 ntBASIC3.87□□□□□ -1.79
CDH13P55290 FGF7P5-201ENST00000441829 291 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH13P55290 RPL26P28-201ENST00000451325 435 ntBASIC3.87□□□□□ -1.79
CDH13P55290 USP9YP34-201ENST00000453983 808 ntBASIC3.87□□□□□ -1.79
CDH13P55290 NECAP1P2-201ENST00000455668 727 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH13P55290 AC026410.2-201ENST00000460281 156 ntBASIC3.87□□□□□ -1.79
CDH13P55290 PLGLA-201ENST00000465668 449 ntBASIC3.87□□□□□ -1.79
CDH13P55290 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH13P55290 AC091951.3-201ENST00000504093 246 ntBASIC3.87□□□□□ -1.79
CDH13P55290 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CDH13P55290 AC104090.1-201ENST00000506341 1171 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH13P55290 AC010587.2-201ENST00000511727 448 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AC010342.1-201ENST00000514047 877 ntBASIC3.87□□□□□ -1.79
CDH13P55290 MRPS36P3-201ENST00000519284 130 ntBASIC3.87□□□□□ -1.79
CDH13P55290 HSPA8P13-201ENST00000523715 472 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AC009643.1-201ENST00000532030 391 ntBASIC3.87□□□□□ -1.79
CDH13P55290 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDH13P55290 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH13P55290 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH13P55290 MTATP6P24-201ENST00000576835 677 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH13P55290 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH13P55290 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH13P55290 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH13P55290 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms