Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MTND1P28-201ENST00000435623 950 ntBASIC4.03□□□□□ -1.76
CDH12P55289 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH12P55289 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH12P55289 AC026410.2-201ENST00000460281 156 ntBASIC4.03□□□□□ -1.76
CDH12P55289 APOOP2-201ENST00000461561 539 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC091564.1-201ENST00000464563 479 ntBASIC4.03□□□□□ -1.76
CDH12P55289 RPS26P3-201ENST00000470205 348 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AL136126.1-201ENST00000473603 402 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC090543.2-201ENST00000483963 348 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC004057.1-201ENST00000485827 348 ntBASIC4.03□□□□□ -1.76
CDH12P55289 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH12P55289 AC025445.1-201ENST00000502728 300 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH12P55289 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH12P55289 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH12P55289 OR51K1P-201ENST00000510214 950 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH12P55289 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH12P55289 OR4A45P-201ENST00000529954 901 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC074029.1-201ENST00000552531 1044 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH12P55289 AL352979.3-201ENST00000553515 247 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH12P55289 HSPE1P3-201ENST00000559254 309 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
CDH12P55289 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH12P55289 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH12P55289 MIR4716-201ENST00000579628 84 ntBASIC4.03□□□□□ -1.76
CDH12P55289 MIR4270-201ENST00000581799 70 ntBASIC4.03□□□□□ -1.76
CDH12P55289 MIR4480-201ENST00000582492 71 ntBASIC4.03□□□□□ -1.76
CDH12P55289 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.03□□□□□ -1.76
CDH12P55289 MIR548AB-201ENST00000584917 84 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC104785.1-201ENST00000603220 588 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC113194.1-201ENST00000606037 500 ntBASIC4.03□□□□□ -1.76
CDH12P55289 MIR432-201ENST00000606207 94 ntBASIC4.03□□□□□ -1.76
CDH12P55289 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AL158196.1-201ENST00000616786 434 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC018529.3-201ENST00000624212 2254 ntBASIC4.03□□□□□ -1.76
CDH12P55289 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CDH12P55289 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDH12P55289 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CDH12P55289 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH12P55289 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH12P55289 AC007529.1-201ENST00000418574 2178 ntBASIC4.03□□□□□ -1.76
CDH12P55289 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CDH12P55289 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH12P55289 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CDH12P55289 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH12P55289 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH12P55289 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH12P55289 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CDH12P55289 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CDH12P55289 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH12P55289 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDH12P55289 RNU5F-6P-201ENST00000362979 116 ntBASIC4.02□□□□□ -1.77
CDH12P55289 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDH12P55289 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CDH12P55289 SNORA75-201ENST00000384158 137 ntBASIC4.02□□□□□ -1.77
CDH12P55289 SNORD66.1-201ENST00000391230 76 ntBASIC4.02□□□□□ -1.77
CDH12P55289 MTCYBP36-201ENST00000404146 440 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC069218.2-201ENST00000411665 344 ntBASIC4.02□□□□□ -1.77
CDH12P55289 HMGB1P11-201ENST00000413899 637 ntBASIC4.02□□□□□ -1.77
CDH12P55289 CDK8P2-201ENST00000415020 547 ntBASIC4.02□□□□□ -1.77
CDH12P55289 MTCO1P21-201ENST00000416634 589 ntBASIC4.02□□□□□ -1.77
CDH12P55289 NUP35P2-201ENST00000416748 943 ntBASIC4.02□□□□□ -1.77
CDH12P55289 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH12P55289 ELOCP18-201ENST00000434209 337 ntBASIC4.02□□□□□ -1.77
CDH12P55289 RPL12P46-201ENST00000436610 195 ntBASIC4.02□□□□□ -1.77
CDH12P55289 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH12P55289 AL353748.1-201ENST00000440753 474 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AL831737.1-201ENST00000441288 271 ntBASIC4.02□□□□□ -1.77
CDH12P55289 MTCO1P27-201ENST00000448269 226 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AL162591.2-201ENST00000449634 317 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC104073.1-201ENST00000451988 151 ntBASIC4.02□□□□□ -1.77
CDH12P55289 TRBV26-201ENST00000456572 344 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH12P55289 RNA5SP269-201ENST00000459032 137 ntBASIC4.02□□□□□ -1.77
CDH12P55289 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH12P55289 RPL7P22-201ENST00000466005 733 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC108941.1-201ENST00000502853 530 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC109458.1-201ENST00000508858 316 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH12P55289 AC016065.2-201ENST00000514530 444 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC104057.1-201ENST00000515547 497 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AP000827.1-201ENST00000527814 258 ntBASIC4.02□□□□□ -1.77
CDH12P55289 OR5D15P-201ENST00000531671 942 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC069061.3-201ENST00000582254 823 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH12P55289 AP000403.1-201ENST00000603349 851 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH12P55289 AC092354.2-201ENST00000607786 514 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC103710.4-201ENST00000609301 899 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AC104073.3-201ENST00000610942 955 ntBASIC4.02□□□□□ -1.77
CDH12P55289 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH12P55289 AC100793.4-201ENST00000613683 429 ntBASIC4.02□□□□□ -1.77
CDH12P55289 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH12P55289 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH12P55289 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms