Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL158053.1-201ENST00000441503 453 ntBASIC3.89□□□□□ -1.79
VCPP55072 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.89□□□□□ -1.79
VCPP55072 AL096829.2-201ENST00000446582 742 ntBASIC3.89□□□□□ -1.79
VCPP55072 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.89□□□□□ -1.79
VCPP55072 AL035407.2-201ENST00000454090 378 ntBASIC3.89□□□□□ -1.79
VCPP55072 TRBV8-2-201ENST00000475637 270 ntBASIC3.89□□□□□ -1.79
VCPP55072 AC078918.1-201ENST00000498515 228 ntBASIC3.89□□□□□ -1.79
VCPP55072 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.89□□□□□ -1.79
VCPP55072 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.89□□□□□ -1.79
VCPP55072 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.89□□□□□ -1.79
VCPP55072 AC112206.4-201ENST00000515142 405 ntBASIC3.89□□□□□ -1.79
VCPP55072 RNA5SP164-201ENST00000516533 110 ntBASIC3.89□□□□□ -1.79
VCPP55072 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.89□□□□□ -1.79
VCPP55072 AP003717.3-201ENST00000544832 1180 ntBASIC3.89□□□□□ -1.79
VCPP55072 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.89□□□□□ -1.79
VCPP55072 AC074029.1-201ENST00000552531 1044 ntBASIC3.89□□□□□ -1.79
VCPP55072 AL121576.1-201ENST00000556055 276 ntBASIC3.89□□□□□ -1.79
VCPP55072 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.89□□□□□ -1.79
VCPP55072 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.89□□□□□ -1.79
VCPP55072 AC125494.3-201ENST00000602759 455 ntBASIC3.89□□□□□ -1.79
VCPP55072 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.89□□□□□ -1.79
VCPP55072 AC021851.1-201ENST00000608537 1082 ntBASIC3.89□□□□□ -1.79
VCPP55072 AP005229.2-201ENST00000609980 697 ntBASIC3.89□□□□□ -1.79
VCPP55072 AL359535.1-201ENST00000612100 1087 ntBASIC3.89□□□□□ -1.79
VCPP55072 AL355365.1-201ENST00000616480 294 ntBASIC3.89□□□□□ -1.79
VCPP55072 STMN1P1-201ENST00000617809 440 ntBASIC3.89□□□□□ -1.79
VCPP55072 AL109620.1-201ENST00000618738 1197 ntBASIC3.89□□□□□ -1.79
VCPP55072 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.89□□□□□ -1.79
VCPP55072 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
VCPP55072 AL365361.1-201ENST00000566942 3481 ntBASIC3.89□□□□□ -1.79
VCPP55072 ANKRD36P1-201ENST00000344424 659 ntBASIC3.88□□□□□ -1.79
VCPP55072 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.88□□□□□ -1.79
VCPP55072 AP002784.2-201ENST00000397300 549 ntBASIC3.88□□□□□ -1.79
VCPP55072 UBA52P6-201ENST00000399822 382 ntBASIC3.88□□□□□ -1.79
VCPP55072 RPL30P2-201ENST00000414021 291 ntBASIC3.88□□□□□ -1.79
VCPP55072 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.88□□□□□ -1.79
VCPP55072 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.88□□□□□ -1.79
VCPP55072 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.88□□□□□ -1.79
VCPP55072 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
VCPP55072 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.88□□□□□ -1.79
VCPP55072 NPM1P49-201ENST00000448027 714 ntBASIC3.88□□□□□ -1.79
VCPP55072 AC006480.1-201ENST00000449887 378 ntBASIC3.88□□□□□ -1.79
VCPP55072 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.88□□□□□ -1.79
VCPP55072 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.88□□□□□ -1.79
VCPP55072 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.88□□□□□ -1.79
VCPP55072 AC026784.1-201ENST00000507986 352 ntBASIC3.88□□□□□ -1.79
VCPP55072 RPL7L1P13-201ENST00000511702 739 ntBASIC3.88□□□□□ -1.79
VCPP55072 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.88□□□□□ -1.79
VCPP55072 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.88□□□□□ -1.79
VCPP55072 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.88□□□□□ -1.79
VCPP55072 AC083923.1-201ENST00000523708 376 ntBASIC3.88□□□□□ -1.79
VCPP55072 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.88□□□□□ -1.79
VCPP55072 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.88□□□□□ -1.79
VCPP55072 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.88□□□□□ -1.79
VCPP55072 AC010928.3-201ENST00000587712 541 ntBASIC3.88□□□□□ -1.79
VCPP55072 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.88□□□□□ -1.79
VCPP55072 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.88□□□□□ -1.79
VCPP55072 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.88□□□□□ -1.79
VCPP55072 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
VCPP55072 AC024595.1-201ENST00000623088 387 ntBASIC3.88□□□□□ -1.79
VCPP55072 AL138960.2-201ENST00000625145 535 ntBASIC3.88□□□□□ -1.79
VCPP55072 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.88□□□□□ -1.79
VCPP55072 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VCPP55072 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VCPP55072 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VCPP55072 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VCPP55072 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VCPP55072 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
VCPP55072 SEC63P2-201ENST00000503863 1939 ntBASIC3.87□□□□□ -1.79
VCPP55072 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCPP55072 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.87□□□□□ -1.79
VCPP55072 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.87□□□□□ -1.79
VCPP55072 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VCPP55072 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
VCPP55072 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VCPP55072 CEP170P1-201ENST00000502249 4587 ntBASIC3.87□□□□□ -1.79
VCPP55072 ENSAP3-201ENST00000312710 333 ntBASIC3.87□□□□□ -1.79
VCPP55072 SNORA31-201ENST00000362607 130 ntBASIC3.87□□□□□ -1.79
VCPP55072 RNU6-301P-201ENST00000384277 107 ntBASIC3.87□□□□□ -1.79
VCPP55072 AL391417.1-201ENST00000404100 426 ntBASIC3.87□□□□□ -1.79
VCPP55072 AL355379.1-201ENST00000405542 640 ntBASIC3.87□□□□□ -1.79
VCPP55072 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.87□□□□□ -1.79
VCPP55072 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.87□□□□□ -1.79
VCPP55072 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.87□□□□□ -1.79
VCPP55072 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.87□□□□□ -1.79
VCPP55072 SETD6P1-201ENST00000444575 317 ntBASIC3.87□□□□□ -1.79
VCPP55072 AC068135.1-201ENST00000446164 246 ntBASIC3.87□□□□□ -1.79
VCPP55072 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.87□□□□□ -1.79
VCPP55072 RNU7-170P-201ENST00000459303 61 ntBASIC3.87□□□□□ -1.79
VCPP55072 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.87□□□□□ -1.79
VCPP55072 AC008565.1-201ENST00000509046 885 ntBASIC3.87□□□□□ -1.79
VCPP55072 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.87□□□□□ -1.79
VCPP55072 OR5D17P-201ENST00000531492 978 ntBASIC3.87□□□□□ -1.79
VCPP55072 AC139103.1-201ENST00000534696 1030 ntBASIC3.87□□□□□ -1.79
VCPP55072 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VCPP55072 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.87□□□□□ -1.79
VCPP55072 KLKP1-201ENST00000595979 403 ntBASIC3.87□□□□□ -1.79
VCPP55072 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.87□□□□□ -1.79
VCPP55072 AC010591.1-201ENST00000603941 649 ntBASIC3.87□□□□□ -1.79
VCPP55072 HMGN2P28-201ENST00000606102 262 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms