Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL450338.1-201ENST00000407987 512 ntBASIC3.85□□□□□ -1.79
PDX1P52945 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.85□□□□□ -1.79
PDX1P52945 RPS15AP40-201ENST00000419621 391 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.85□□□□□ -1.79
PDX1P52945 ELOCP18-201ENST00000434209 337 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC241584.1-201ENST00000438469 1241 ntBASIC3.85□□□□□ -1.79
PDX1P52945 RPS26P56-201ENST00000444468 240 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.85□□□□□ -1.79
PDX1P52945 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.85□□□□□ -1.79
PDX1P52945 RPL12P26-201ENST00000452430 487 ntBASIC3.85□□□□□ -1.79
PDX1P52945 PRSS3P4-201ENST00000453323 162 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC133473.1-201ENST00000455173 299 ntBASIC3.85□□□□□ -1.79
PDX1P52945 RN7SL323P-201ENST00000494712 295 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC104090.1-201ENST00000506341 1171 ntBASIC3.85□□□□□ -1.79
PDX1P52945 MTCYBP37-201ENST00000510642 1133 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC093853.1-201ENST00000515689 483 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.85□□□□□ -1.79
PDX1P52945 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.85□□□□□ -1.79
PDX1P52945 AC026403.1-201ENST00000518938 295 ntBASIC3.85□□□□□ -1.79
PDX1P52945 NDUFA5P2-201ENST00000519723 344 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC027309.2-201ENST00000520566 192 ntBASIC3.85□□□□□ -1.79
PDX1P52945 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDX1P52945 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.85□□□□□ -1.79
PDX1P52945 PDCL2P2-201ENST00000533651 189 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.85□□□□□ -1.79
PDX1P52945 YPEL5P3-201ENST00000547227 352 ntBASIC3.85□□□□□ -1.79
PDX1P52945 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.85□□□□□ -1.79
PDX1P52945 AC007599.1-201ENST00000568688 1174 ntBASIC3.85□□□□□ -1.79
PDX1P52945 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.85□□□□□ -1.79
PDX1P52945 AL139344.1-201ENST00000605228 195 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC097478.2-201ENST00000610572 514 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC000123.2-201ENST00000623124 461 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC017037.3-201ENST00000625016 472 ntBASIC3.85□□□□□ -1.79
PDX1P52945 AC097655.1-201ENST00000635075 318 ntBASIC3.85□□□□□ -1.79
PDX1P52945 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.85□□□□□ -1.79
PDX1P52945 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PDX1P52945 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
PDX1P52945 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDX1P52945 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDX1P52945 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.85□□□□□ -1.79
PDX1P52945 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDX1P52945 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PDX1P52945 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
PDX1P52945 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDX1P52945 ZNF285B-201ENST00000561698 1767 ntBASIC3.84□□□□□ -1.79
PDX1P52945 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDX1P52945 RSL24D1P4-201ENST00000400938 484 ntBASIC3.84□□□□□ -1.79
PDX1P52945 SNORA57.3-201ENST00000411095 141 ntBASIC3.84□□□□□ -1.79
PDX1P52945 RPS3AP9-201ENST00000417027 792 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 AL139421.1-201ENST00000423010 169 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.84□□□□□ -1.79
PDX1P52945 AC091286.1-201ENST00000431233 461 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AL050321.1-201ENST00000432363 400 ntBASIC3.84□□□□□ -1.79
PDX1P52945 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.84□□□□□ -1.79
PDX1P52945 MTND1P32-201ENST00000433043 938 ntBASIC3.84□□□□□ -1.79
PDX1P52945 RPL7P34-201ENST00000433316 712 ntBASIC3.84□□□□□ -1.79
PDX1P52945 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 ELOCP8-201ENST00000439309 332 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.84□□□□□ -1.79
PDX1P52945 ELOCP15-201ENST00000442090 332 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 EXTL2P1-201ENST00000446218 416 ntBASIC3.84□□□□□ -1.79
PDX1P52945 MTCO2P25-201ENST00000447065 681 ntBASIC3.84□□□□□ -1.79
PDX1P52945 RPL7P31-201ENST00000450192 724 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.84□□□□□ -1.79
PDX1P52945 HMGN3P1-201ENST00000453847 193 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.84□□□□□ -1.79
PDX1P52945 MTCO2P6-201ENST00000463134 685 ntBASIC3.84□□□□□ -1.79
PDX1P52945 ACTG1P13-201ENST00000486987 1043 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AC005726.1-201ENST00000494679 427 ntBASIC3.84□□□□□ -1.79
PDX1P52945 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.84□□□□□ -1.79
PDX1P52945 AC079395.1-201ENST00000510981 262 ntBASIC3.84□□□□□ -1.79
PDX1P52945 RNY4P37-201ENST00000516225 96 ntBASIC3.84□□□□□ -1.79
PDX1P52945 RNU7-143P-201ENST00000516781 65 ntBASIC3.84□□□□□ -1.79
PDX1P52945 RNU6-1261P-201ENST00000517194 104 ntBASIC3.84□□□□□ -1.79
PDX1P52945 PAICSP4-201ENST00000517543 1253 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.84□□□□□ -1.79
PDX1P52945 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.84□□□□□ -1.79
PDX1P52945 AP000619.3-201ENST00000535634 1127 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDX1P52945 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.84□□□□□ -1.79
PDX1P52945 AC074029.1-201ENST00000552531 1044 ntBASIC3.84□□□□□ -1.79
PDX1P52945 HIGD1AP17-201ENST00000554576 276 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.84□□□□□ -1.79
PDX1P52945 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.84□□□□□ -1.79
PDX1P52945 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.84□□□□□ -1.79
PDX1P52945 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.84□□□□□ -1.79
PDX1P52945 AL354943.1-201ENST00000572103 781 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.84□□□□□ -1.79
PDX1P52945 AL158042.1-201ENST00000605338 460 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms