Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.26□□□□□ -1.73
CLCN3P51790 AC087465.1-201ENST00000560574 245 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 AC053481.3-201ENST00000577881 843 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 AC067852.4-201ENST00000590314 478 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 AL008729.2-201ENST00000606393 473 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCN3P51790 AL360219.1-201ENST00000610230 366 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 AL450489.1-201ENST00000612071 468 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCN3P51790 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCN3P51790 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCN3P51790 ZNF285B-201ENST00000561698 1767 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCN3P51790 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCN3P51790 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCN3P51790 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCN3P51790 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCN3P51790 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCN3P51790 AC109315.1-201ENST00000584143 1347 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCN3P51790 KPNA2P2-201ENST00000419546 1489 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCN3P51790 SNORA71.3-201ENST00000362582 128 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 Y_RNA.192-201ENST00000363977 102 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 RNU6-921P-201ENST00000384361 107 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 SNORD3H-201ENST00000384486 214 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 RNU6-441P-201ENST00000384545 106 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 RNA5SP80-201ENST00000410475 111 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 AC096632.1-201ENST00000427395 310 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCN3P51790 VN1R108P-201ENST00000431580 830 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AL117351.1-201ENST00000438864 766 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 RPS17P13-201ENST00000448974 407 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCN3P51790 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.25□□□□□ -1.73
CLCN3P51790 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCN3P51790 RPL21P134-201ENST00000453468 483 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCN3P51790 AC091564.1-201ENST00000464563 479 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AC087879.1-201ENST00000474343 374 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.25□□□□□ -1.73
CLCN3P51790 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCN3P51790 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCN3P51790 AC079395.1-201ENST00000510981 262 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 FABP5P12-201ENST00000515543 389 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 RN7SKP31-201ENST00000516354 278 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 SNORA48.10-201ENST00000516965 160 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 OR5M7P-201ENST00000526140 972 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AP000790.1-201ENST00000528891 737 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCN3P51790 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.25□□□□□ -1.73
CLCN3P51790 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCN3P51790 AC069240.1-201ENST00000548774 375 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AL161713.1-201ENST00000555538 145 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AC109446.2-201ENST00000567872 497 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCN3P51790 AC009220.3-201ENST00000604318 586 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AC012603.1-201ENST00000606424 528 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AL451074.6-201ENST00000608512 729 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 AC131238.1-201ENST00000617135 328 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLCN3P51790 FAM157B-203ENST00000639350 358 ntBASIC4.25□□□□□ -1.73
CLCN3P51790 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCN3P51790 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CLCN3P51790 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLCN3P51790 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCN3P51790 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CLCN3P51790 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCN3P51790 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLCN3P51790 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCN3P51790 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLCN3P51790 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCN3P51790 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCN3P51790 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCN3P51790 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCN3P51790 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCN3P51790 FAM133CP-201ENST00000332869 704 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 MIR448-201ENST00000362131 111 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 RNU5D-1-201ENST00000363299 116 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 RNU6-621P-201ENST00000364752 109 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AC019155.1-201ENST00000382242 574 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 RNU6-83P-201ENST00000384568 112 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 MIR649-201ENST00000384843 97 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 MIR200C-201ENST00000384980 68 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 MIR199A2-201ENST00000385289 110 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCN3P51790 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms