Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 AC105235.1-201ENST00000623208 1816 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RNF144AP50876 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 XIAPP3-201ENST00000312918 795 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 SNORD27-201ENST00000363981 72 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 SNORD82-201ENST00000365530 70 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 RNU6-187P-201ENST00000384139 106 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 RNU6-842P-201ENST00000384269 107 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 RNU6-434P-201ENST00000384376 107 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RNF144AP50876 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF144AP50876 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF144AP50876 AC234779.1-201ENST00000425910 285 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 RHOT1P3-201ENST00000436571 331 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 RPL12P49-201ENST00000441100 121 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 CHEK2P4-201ENST00000450340 246 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 CYCSP34-201ENST00000458172 304 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 RN7SL39P-201ENST00000462264 297 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 AC093815.1-201ENST00000508637 280 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF144AP50876 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF144AP50876 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF144AP50876 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF144AP50876 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 AC009779.6-201ENST00000603972 165 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 RAC1P9-201ENST00000604990 392 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 AC004792.1-201ENST00000614523 137 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 AL162377.2-201ENST00000624532 337 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 AC099654.15-201ENST00000639802 509 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 AL445437.1-201ENST00000623157 3087 ntBASIC5.88□□□□□ -1.47
RNF144AP50876 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RNF144AP50876 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
RNF144AP50876 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RNF144AP50876 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF144AP50876 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF144AP50876 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF144AP50876 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF144AP50876 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.87□□□□□ -1.47
RNF144AP50876 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF144AP50876 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF144AP50876 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF144AP50876 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RNF144AP50876 RNA5SP77-201ENST00000365394 120 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF144AP50876 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF144AP50876 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF144AP50876 RNU6-662P-201ENST00000384253 104 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 AC110754.1-201ENST00000399740 601 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 RAC1P3-201ENST00000416129 580 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.87□□□□□ -1.47
RNF144AP50876 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.87□□□□□ -1.47
RNF144AP50876 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF144AP50876 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF144AP50876 AC087884.1-201ENST00000469738 328 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 OR9A1P-202ENST00000484361 945 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 GM2AP2-201ENST00000491764 562 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF144AP50876 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF144AP50876 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF144AP50876 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 MRPS5P3-201ENST00000515577 166 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF144AP50876 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF144AP50876 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.87□□□□□ -1.47
RNF144AP50876 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.87□□□□□ -1.47
RNF144AP50876 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF144AP50876 AL049839.1-201ENST00000556151 657 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.87□□□□□ -1.47
RNF144AP50876 RPL7AP69-201ENST00000595306 806 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF144AP50876 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF144AP50876 AL118522.2-201ENST00000616045 615 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 MIR6823-201ENST00000622118 61 ntBASIC5.87□□□□□ -1.47
RNF144AP50876 AC089999.3-201ENST00000622440 577 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms