Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL603865.2-201ENST00000401679 213 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 RPL7P27-201ENST00000403775 720 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 RN7SKP53-201ENST00000411337 315 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCLP35914 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCLP35914 CYCSP43-201ENST00000438233 310 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 AL645638.1-201ENST00000440519 361 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 MTCO1P53-201ENST00000441633 699 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCLP35914 PPIAP3-201ENST00000450588 505 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 RPS20P32-201ENST00000456044 356 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGCLP35914 AC084357.1-201ENST00000473404 255 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 RPS27P23-201ENST00000487608 251 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCLP35914 SETP14-201ENST00000497538 873 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 GTF2IP9-201ENST00000502460 301 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCLP35914 AC104619.4-201ENST00000510773 249 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 AC093752.1-206ENST00000511823 336 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 RN7SKP283-201ENST00000517197 270 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 AC091163.3-201ENST00000518269 1144 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCLP35914 AC026403.1-201ENST00000518938 295 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCLP35914 AP006245.1-201ENST00000522549 120 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGCLP35914 AC104417.1-201ENST00000523974 751 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 NDUFS5P6-201ENST00000529136 295 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 AC139103.1-201ENST00000534696 1030 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCLP35914 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGCLP35914 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCLP35914 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCLP35914 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCLP35914 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCLP35914 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGCLP35914 AP004247.3-201ENST00000608682 624 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 AL121652.1-201ENST00000608851 448 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 MIR7851-201ENST00000610611 160 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 AL050303.3-201ENST00000613704 284 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 MIR8058-201ENST00000615737 89 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 XIST_intron.1-201ENST00000619444 68 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCLP35914 AL034408.1-202ENST00000636088 415 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 AL590396.4-201ENST00000636779 956 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGCLP35914 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCLP35914 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCLP35914 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
HMGCLP35914 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCLP35914 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HMGCLP35914 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HMGCLP35914 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCLP35914 AC138915.3-201ENST00000562908 1389 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HMGCLP35914 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCLP35914 ANKRD36P1-201ENST00000344424 659 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HMGCLP35914 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HMGCLP35914 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCLP35914 MIR16-1-201ENST00000385271 89 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HMGCLP35914 HSPE1P26-201ENST00000405341 275 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 TAF13P2-201ENST00000416876 286 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCLP35914 MTCYBP15-201ENST00000433123 1127 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCLP35914 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCLP35914 AL606517.1-201ENST00000446914 387 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 AC004801.2-202ENST00000463559 283 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCLP35914 RPS3AP50-201ENST00000487064 803 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCLP35914 AC008837.1-201ENST00000511513 412 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 AC110760.3-202ENST00000515177 371 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 RNU6-276P-201ENST00000516114 96 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 SNORA19.3-201ENST00000516165 130 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 AC021451.1-201ENST00000523498 1129 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCLP35914 OR5AP1P-201ENST00000529730 940 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCLP35914 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCLP35914 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCLP35914 AC006254.3-201ENST00000603353 884 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 RPP40P2-201ENST00000603596 712 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 RNA5SP108-201ENST00000605921 117 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCLP35914 AC105429.2-201ENST00000610567 517 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 AC048347.1-201ENST00000624621 427 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCLP35914 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCLP35914 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HMGCLP35914 AC068647.1-201ENST00000489539 2265 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 SAGE4P-201ENST00000442271 3381 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCLP35914 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCLP35914 AC091152.2-201ENST00000591628 2569 ntBASIC3.54□□□□□ -1.84
HMGCLP35914 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms