Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AP004607.9-201ENST00000618202 316 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 AC019080.5-201ENST00000624891 757 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 AL691447.3-201ENST00000635020 330 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.47□□□□□ -1.85
SCN4AP35499 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCN4AP35499 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SCN4AP35499 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SCN4AP35499 CR382285.2-201ENST00000624662 1495 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCN4AP35499 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCN4AP35499 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN4AP35499 VN1R31P-201ENST00000417498 730 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 AC233981.1-201ENST00000423224 461 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 AL162388.1-201ENST00000450912 352 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.47□□□□□ -1.85
SCN4AP35499 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.47□□□□□ -1.85
SCN4AP35499 RN7SKP283-201ENST00000517197 270 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN4AP35499 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.47□□□□□ -1.85
SCN4AP35499 AC084033.1-201ENST00000550830 633 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.47□□□□□ -1.85
SCN4AP35499 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN4AP35499 AC006254.3-201ENST00000603353 884 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 OR6R2P-201ENST00000609216 300 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
SCN4AP35499 AP003122.5-201ENST00000527668 3766 ntBASIC3.46□□□□□ -1.85
SCN4AP35499 FAM133CP-201ENST00000332869 704 ntBASIC3.46□□□□□ -1.86
SCN4AP35499 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.46□□□□□ -1.86
SCN4AP35499 RANP4-201ENST00000413361 655 ntBASIC3.46□□□□□ -1.86
SCN4AP35499 AC013470.3-201ENST00000420252 1194 ntBASIC3.46□□□□□ -1.86
SCN4AP35499 Z99127.2-201ENST00000441426 334 ntBASIC3.46□□□□□ -1.86
SCN4AP35499 MTCYBP14-201ENST00000457471 715 ntBASIC3.46□□□□□ -1.86
SCN4AP35499 HMGN1P18-201ENST00000457642 277 ntBASIC3.46□□□□□ -1.86
SCN4AP35499 RPS20P22-201ENST00000473700 357 ntBASIC3.46□□□□□ -1.86
SCN4AP35499 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SCN4AP35499 AC008549.1-201ENST00000512900 643 ntBASIC3.46□□□□□ -1.86
SCN4AP35499 AP000873.5-201ENST00000533906 236 ntBASIC3.46□□□□□ -1.86
SCN4AP35499 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.46□□□□□ -1.86
SCN4AP35499 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SCN4AP35499 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.46□□□□□ -1.86
SCN4AP35499 AC066616.2-201ENST00000559334 1481 ntBASIC3.45□□□□□ -1.86
SCN4AP35499 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SCN4AP35499 RNU1-112P-201ENST00000364401 164 ntBASIC3.45□□□□□ -1.86
SCN4AP35499 EI24P2-201ENST00000397776 1076 ntBASIC3.45□□□□□ -1.86
SCN4AP35499 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN4AP35499 OR6C72P-201ENST00000451403 892 ntBASIC3.45□□□□□ -1.86
SCN4AP35499 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.45□□□□□ -1.86
SCN4AP35499 SNORA70.14-201ENST00000516205 110 ntBASIC3.45□□□□□ -1.86
SCN4AP35499 AC093331.1-201ENST00000521474 169 ntBASIC3.45□□□□□ -1.86
SCN4AP35499 SNORD53-201ENST00000579969 78 ntBASIC3.45□□□□□ -1.86
SCN4AP35499 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN4AP35499 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN4AP35499 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SCN4AP35499 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN4AP35499 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN4AP35499 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SCN4AP35499 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN4AP35499 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SCN4AP35499 AC245100.2-201ENST00000454544 1679 ntBASIC3.45□□□□□ -1.86
SCN4AP35499 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
SCN4AP35499 AC022031.1-201ENST00000585985 2593 ntBASIC3.45□□□□□ -1.86
SCN4AP35499 U3.11-201ENST00000364476 212 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 AC110754.1-201ENST00000399740 601 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN4AP35499 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.44□□□□□ -1.86
SCN4AP35499 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.44□□□□□ -1.86
SCN4AP35499 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN4AP35499 TXNP6-201ENST00000510190 310 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 AC008837.1-201ENST00000511513 412 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 Y_RNA.676-201ENST00000516393 96 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 RN7SKP60-201ENST00000516985 239 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 IGKV3-31-201ENST00000523109 329 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 AC025857.1-201ENST00000525252 377 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SCN4AP35499 MIR3186-201ENST00000577404 85 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN4AP35499 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN4AP35499 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN4AP35499 PWAR6-201ENST00000552334 4618 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SCN4AP35499 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SCN4AP35499 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN4AP35499 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SCN4AP35499 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
SCN4AP35499 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SCN4AP35499 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SCN4AP35499 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SCN4AP35499 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SCN4AP35499 MRPS33P4-201ENST00000434892 317 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 CBX1P4-201ENST00000439415 457 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 AC125238.1-201ENST00000448842 249 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 RPL21P71-201ENST00000465598 459 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 AC021087.2-201ENST00000504656 1203 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN4AP35499 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN4AP35499 AC027176.1-201ENST00000560204 514 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 VN1R81P-201ENST00000602085 372 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 AC007566.2-201ENST00000603642 413 ntBASIC3.44□□□□□ -1.86
SCN4AP35499 AC098826.3-201ENST00000603823 466 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms