Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 Y_RNA.192-201ENST00000363977 102 ntBASIC3.51□□□□□ -1.85
SHC1P29353 RNU6-707P-201ENST00000364647 95 ntBASIC3.51□□□□□ -1.85
SHC1P29353 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.51□□□□□ -1.85
SHC1P29353 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.51□□□□□ -1.85
SHC1P29353 RNU6-1279P-201ENST00000383917 103 ntBASIC3.51□□□□□ -1.85
SHC1P29353 RNU6-157P-201ENST00000383957 107 ntBASIC3.51□□□□□ -1.85
SHC1P29353 SNORD116-9-201ENST00000384000 95 ntBASIC3.51□□□□□ -1.85
SHC1P29353 SNORD116-3-201ENST00000384287 95 ntBASIC3.51□□□□□ -1.85
SHC1P29353 SNORD116-7-201ENST00000384404 95 ntBASIC3.51□□□□□ -1.85
SHC1P29353 SNORD116-5-201ENST00000384462 95 ntBASIC3.51□□□□□ -1.85
SHC1P29353 LUZP4P1-201ENST00000415420 344 ntBASIC3.51□□□□□ -1.85
SHC1P29353 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.51□□□□□ -1.85
SHC1P29353 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.51□□□□□ -1.85
SHC1P29353 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.51□□□□□ -1.85
SHC1P29353 OR5AW1P-201ENST00000426334 1006 ntBASIC3.51□□□□□ -1.85
SHC1P29353 RWDD4P2-201ENST00000426392 563 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AL390023.1-201ENST00000428836 262 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.51□□□□□ -1.85
SHC1P29353 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.51□□□□□ -1.85
SHC1P29353 MTND5P2-201ENST00000442927 1142 ntBASIC3.51□□□□□ -1.85
SHC1P29353 MTND2P4-201ENST00000445034 1004 ntBASIC3.51□□□□□ -1.85
SHC1P29353 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHC1P29353 OR9M1P-201ENST00000459641 921 ntBASIC3.51□□□□□ -1.85
SHC1P29353 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.51□□□□□ -1.85
SHC1P29353 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.51□□□□□ -1.85
SHC1P29353 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.51□□□□□ -1.85
SHC1P29353 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHC1P29353 AC104108.1-201ENST00000509930 412 ntBASIC3.51□□□□□ -1.85
SHC1P29353 OR5H4P-201ENST00000510851 923 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AC008837.2-201ENST00000513076 418 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AC117532.1-201ENST00000514638 323 ntBASIC3.51□□□□□ -1.85
SHC1P29353 IGKV2D-23-201ENST00000518179 286 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AC023632.1-201ENST00000518463 375 ntBASIC3.51□□□□□ -1.85
SHC1P29353 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.51□□□□□ -1.85
SHC1P29353 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.51□□□□□ -1.85
SHC1P29353 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.51□□□□□ -1.85
SHC1P29353 AC124293.1-201ENST00000530034 493 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AP002812.4-201ENST00000532139 286 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.51□□□□□ -1.85
SHC1P29353 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.51□□□□□ -1.85
SHC1P29353 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.51□□□□□ -1.85
SHC1P29353 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.51□□□□□ -1.85
SHC1P29353 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.51□□□□□ -1.85
SHC1P29353 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.51□□□□□ -1.85
SHC1P29353 NIFKP8-201ENST00000560500 874 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.51□□□□□ -1.85
SHC1P29353 AC099489.2-201ENST00000574976 260 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.51□□□□□ -1.85
SHC1P29353 MIR4286-201ENST00000580651 93 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.51□□□□□ -1.85
SHC1P29353 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.51□□□□□ -1.85
SHC1P29353 AC022916.3-201ENST00000592961 742 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AP001542.2-201ENST00000593141 364 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AL451086.1-201ENST00000605596 223 ntBASIC3.51□□□□□ -1.85
SHC1P29353 BRDTP1-201ENST00000605735 677 ntBASIC3.51□□□□□ -1.85
SHC1P29353 FP236240.3-201ENST00000623061 327 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AC109454.4-201ENST00000623411 649 ntBASIC3.51□□□□□ -1.85
SHC1P29353 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.51□□□□□ -1.85
SHC1P29353 AC244205.2-202ENST00000635781 342 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AF001550.2-201ENST00000636643 217 ntBASIC3.51□□□□□ -1.85
SHC1P29353 AC068620.4-201ENST00000636730 1182 ntBASIC3.51□□□□□ -1.85
SHC1P29353 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.51□□□□□ -1.85
SHC1P29353 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHC1P29353 AC106871.1-201ENST00000568324 3102 ntBASIC3.51□□□□□ -1.85
SHC1P29353 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHC1P29353 AC021755.1-201ENST00000559747 1447 ntBASIC3.51□□□□□ -1.85
SHC1P29353 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHC1P29353 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHC1P29353 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHC1P29353 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 Y_RNA.126-201ENST00000363382 111 ntBASIC3.5□□□□□ -1.85
SHC1P29353 Y_RNA.465-201ENST00000384293 102 ntBASIC3.5□□□□□ -1.85
SHC1P29353 SNORA57.1-201ENST00000391227 145 ntBASIC3.5□□□□□ -1.85
SHC1P29353 AL590290.1-201ENST00000405336 380 ntBASIC3.5□□□□□ -1.85
SHC1P29353 RHEBP3-201ENST00000411920 351 ntBASIC3.5□□□□□ -1.85
SHC1P29353 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.5□□□□□ -1.85
SHC1P29353 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.5□□□□□ -1.85
SHC1P29353 AL365203.2-201ENST00000423444 196 ntBASIC3.5□□□□□ -1.85
SHC1P29353 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.5□□□□□ -1.85
SHC1P29353 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.5□□□□□ -1.85
SHC1P29353 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.5□□□□□ -1.85
SHC1P29353 AC009263.1-201ENST00000441193 1239 ntBASIC3.5□□□□□ -1.85
SHC1P29353 AC092809.1-201ENST00000441469 474 ntBASIC3.5□□□□□ -1.85
SHC1P29353 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 AC118469.1-201ENST00000442943 488 ntBASIC3.5□□□□□ -1.85
SHC1P29353 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 NDUFS5P3-201ENST00000450668 321 ntBASIC3.5□□□□□ -1.85
SHC1P29353 RPS27AP8-201ENST00000452665 445 ntBASIC3.5□□□□□ -1.85
SHC1P29353 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.5□□□□□ -1.85
SHC1P29353 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.5□□□□□ -1.85
SHC1P29353 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.5□□□□□ -1.85
SHC1P29353 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.5□□□□□ -1.85
SHC1P29353 RNU6-416P-201ENST00000516265 103 ntBASIC3.5□□□□□ -1.85
SHC1P29353 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.5□□□□□ -1.85
SHC1P29353 MTCO1P49-201ENST00000523429 802 ntBASIC3.5□□□□□ -1.85
SHC1P29353 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.5□□□□□ -1.85
SHC1P29353 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms