Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 MTCO1P8-201ENST00000416914 1523 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 FAM35CP-201ENST00000554755 2470 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DMBP28068 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DMBP28068 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DMBP28068 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 SDCBPP3-201ENST00000419629 891 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC006960.1-201ENST00000419980 153 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AL158156.1-201ENST00000422509 473 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 RPF2P1-201ENST00000424137 906 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 RPL21P112-201ENST00000434403 463 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 RPL23AP83-201ENST00000434984 473 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC005019.1-201ENST00000436455 431 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 HMGB1P12-201ENST00000438594 598 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 HSPE1P28-201ENST00000443139 211 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 ARPC3P2-201ENST00000457786 533 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 RN7SL601P-201ENST00000471221 293 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 VN1R17P-201ENST00000472048 1090 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC073522.1-201ENST00000483312 377 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 NCOR1P1-202ENST00000486162 291 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC093663.1-201ENST00000497190 394 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 APOOP4-201ENST00000513530 597 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 SNORA70.24-201ENST00000517233 118 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AP001207.2-201ENST00000519490 539 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC104997.1-201ENST00000519761 717 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC245166.1-201ENST00000521012 253 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC008562.1-201ENST00000521763 330 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DMBP28068 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 SYF2P1-201ENST00000550658 413 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 POLR2KP1-201ENST00000553226 168 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC034268.2-201ENST00000571784 482 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC017100.2-201ENST00000584628 355 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 SNRPGP15-201ENST00000600149 222 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC091488.1-201ENST00000604239 660 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AL359535.1-201ENST00000612100 1087 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AL356321.1-201ENST00000621360 228 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC091903.1-201ENST00000624322 454 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DMBP28068 MTND5P7-201ENST00000413558 1798 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DMBP28068 AC073346.2-201ENST00000624724 2058 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DMBP28068 ELL2P4-201ENST00000446870 1376 ntBASIC2.48□□□□□ -2.01
HLA-DMBP28068 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DMBP28068 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DMBP28068 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DMBP28068 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 RNU4-23P-201ENST00000362839 140 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 RNU1-33P-201ENST00000364249 162 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 RNA5SP267-201ENST00000364893 126 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 RNU6-98P-201ENST00000384173 107 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 BTBD10P2-201ENST00000404779 676 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 AL031121.1-201ENST00000406553 254 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 MTATP6P31-201ENST00000406985 692 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 RN7SKP123-201ENST00000410732 291 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 AC010385.1-201ENST00000412374 256 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 PSMA2P3-201ENST00000429685 675 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 Z77249.1-201ENST00000444622 1175 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 AC093392.2-201ENST00000450682 337 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 snoU13.7-201ENST00000459220 104 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 AC012181.1-201ENST00000479895 423 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 RPS4XP13-201ENST00000483219 789 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 CAB39P1-201ENST00000502277 460 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 AC021678.1-201ENST00000505195 936 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 HSPD1P15-201ENST00000505573 1122 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 AC093770.1-201ENST00000511559 571 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 AC008494.2-201ENST00000514544 370 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 HIGD1AP3-201ENST00000515857 278 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 COX6B1P6-201ENST00000522347 255 ntBASIC2.47□□□□□ -2.01
HLA-DMBP28068 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DMBP28068 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms