Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.3□□□□□ -1.4
VARSP26640 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.3□□□□□ -1.4
VARSP26640 Y_RNA.19-201ENST00000362462 99 ntBASIC6.3□□□□□ -1.4
VARSP26640 SNORD27-201ENST00000363981 72 ntBASIC6.3□□□□□ -1.4
VARSP26640 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VARSP26640 RNU6-338P-201ENST00000383888 105 ntBASIC6.3□□□□□ -1.4
VARSP26640 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
VARSP26640 AC110754.1-201ENST00000399740 601 ntBASIC6.3□□□□□ -1.4
VARSP26640 AL445189.1-201ENST00000405722 338 ntBASIC6.3□□□□□ -1.4
VARSP26640 RAC1P3-201ENST00000416129 580 ntBASIC6.3□□□□□ -1.4
VARSP26640 AL359092.1-201ENST00000417156 265 ntBASIC6.3□□□□□ -1.4
VARSP26640 CYCSP52-201ENST00000422857 310 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC007568.1-201ENST00000422912 471 ntBASIC6.3□□□□□ -1.4
VARSP26640 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.3□□□□□ -1.4
VARSP26640 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.3□□□□□ -1.4
VARSP26640 RPL23AP69-201ENST00000431134 458 ntBASIC6.3□□□□□ -1.4
VARSP26640 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.3□□□□□ -1.4
VARSP26640 AL359672.1-201ENST00000442302 409 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC016696.1-201ENST00000446949 318 ntBASIC6.3□□□□□ -1.4
VARSP26640 CHEK2P4-201ENST00000450340 246 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC092647.2-201ENST00000452998 253 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC245028.2-201ENST00000458673 253 ntBASIC6.3□□□□□ -1.4
VARSP26640 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.3□□□□□ -1.4
VARSP26640 AC026801.1-201ENST00000497178 464 ntBASIC6.3□□□□□ -1.4
VARSP26640 AL139099.1-201ENST00000497398 403 ntBASIC6.3□□□□□ -1.4
VARSP26640 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.3□□□□□ -1.4
VARSP26640 AC093767.1-201ENST00000504523 156 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC108078.2-201ENST00000510750 236 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC093816.1-201ENST00000515076 913 ntBASIC6.3□□□□□ -1.4
VARSP26640 SCARNA5-201ENST00000516201 276 ntBASIC6.3□□□□□ -1.4
VARSP26640 SNORA40.14-201ENST00000516543 86 ntBASIC6.3□□□□□ -1.4
VARSP26640 SNORA40.15-201ENST00000516884 107 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC011853.1-201ENST00000518911 454 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.3□□□□□ -1.4
VARSP26640 AP005639.1-201ENST00000526939 192 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.3□□□□□ -1.4
VARSP26640 RPA2P3-201ENST00000533268 770 ntBASIC6.3□□□□□ -1.4
VARSP26640 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.3□□□□□ -1.4
VARSP26640 AC091516.1-201ENST00000549191 703 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC026371.1-201ENST00000551867 419 ntBASIC6.3□□□□□ -1.4
VARSP26640 AC068446.3-201ENST00000555285 382 ntBASIC6.3□□□□□ -1.4
VARSP26640 SUB1P3-201ENST00000564581 315 ntBASIC6.3□□□□□ -1.4
VARSP26640 RAC1P9-201ENST00000604990 392 ntBASIC6.3□□□□□ -1.4
VARSP26640 AL138825.1-201ENST00000618587 192 ntBASIC6.3□□□□□ -1.4
VARSP26640 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
VARSP26640 AC009313.2-201ENST00000417893 1941 ntBASIC6.3□□□□□ -1.4
VARSP26640 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
VARSP26640 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VARSP26640 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.29□□□□□ -1.4
VARSP26640 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.29□□□□□ -1.4
VARSP26640 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
VARSP26640 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
VARSP26640 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
VARSP26640 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 RNA5SP232-201ENST00000364144 119 ntBASIC6.29□□□□□ -1.4
VARSP26640 RN7SKP186-201ENST00000365371 303 ntBASIC6.29□□□□□ -1.4
VARSP26640 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
VARSP26640 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.29□□□□□ -1.4
VARSP26640 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 RNU6-886P-201ENST00000384319 105 ntBASIC6.29□□□□□ -1.4
VARSP26640 RNU11-201ENST00000387069 134 ntBASIC6.29□□□□□ -1.4
VARSP26640 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
VARSP26640 DBIP1-201ENST00000401435 260 ntBASIC6.29□□□□□ -1.4
VARSP26640 RNA5SP115-201ENST00000411160 107 ntBASIC6.29□□□□□ -1.4
VARSP26640 RNU6-387P-201ENST00000411331 105 ntBASIC6.29□□□□□ -1.4
VARSP26640 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.29□□□□□ -1.4
VARSP26640 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.29□□□□□ -1.4
VARSP26640 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.29□□□□□ -1.4
VARSP26640 RPL21P109-201ENST00000422213 475 ntBASIC6.29□□□□□ -1.4
VARSP26640 FAR2P4-202ENST00000425399 584 ntBASIC6.29□□□□□ -1.4
VARSP26640 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.29□□□□□ -1.4
VARSP26640 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.29□□□□□ -1.4
VARSP26640 AC092162.1-201ENST00000432828 434 ntBASIC6.29□□□□□ -1.4
VARSP26640 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC6.29□□□□□ -1.4
VARSP26640 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.29□□□□□ -1.4
VARSP26640 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.29□□□□□ -1.4
VARSP26640 AL645936.1-201ENST00000441979 518 ntBASIC6.29□□□□□ -1.4
VARSP26640 MTCO3P8-201ENST00000453691 755 ntBASIC6.29□□□□□ -1.4
VARSP26640 PCMTD1P1-201ENST00000455560 355 ntBASIC6.29□□□□□ -1.4
VARSP26640 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VARSP26640 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
VARSP26640 CEACAMP10-202ENST00000495431 496 ntBASIC6.29□□□□□ -1.4
VARSP26640 AC083829.1-201ENST00000503756 657 ntBASIC6.29□□□□□ -1.4
VARSP26640 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.29□□□□□ -1.4
VARSP26640 AC113367.2-201ENST00000505749 160 ntBASIC6.29□□□□□ -1.4
VARSP26640 RBBP4P6-201ENST00000508098 202 ntBASIC6.29□□□□□ -1.4
VARSP26640 RNU6-798P-201ENST00000516912 103 ntBASIC6.29□□□□□ -1.4
VARSP26640 IGHV1-14-201ENST00000523391 241 ntBASIC6.29□□□□□ -1.4
VARSP26640 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.29□□□□□ -1.4
VARSP26640 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.29□□□□□ -1.4
VARSP26640 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.29□□□□□ -1.4
VARSP26640 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms