Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.9□□□□□ -1.95
CD74P04233 AC006960.1-201ENST00000419980 153 ntBASIC2.9□□□□□ -1.95
CD74P04233 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.9□□□□□ -1.95
CD74P04233 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.9□□□□□ -1.95
CD74P04233 SSXP4-201ENST00000451349 245 ntBASIC2.9□□□□□ -1.95
CD74P04233 AL133162.1-201ENST00000463228 453 ntBASIC2.9□□□□□ -1.95
CD74P04233 RN7SL283P-201ENST00000489055 303 ntBASIC2.9□□□□□ -1.95
CD74P04233 RPL21P129-201ENST00000491732 478 ntBASIC2.9□□□□□ -1.95
CD74P04233 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
CD74P04233 AC008565.1-201ENST00000509046 885 ntBASIC2.9□□□□□ -1.95
CD74P04233 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.9□□□□□ -1.95
CD74P04233 RNU1-143P-201ENST00000516296 146 ntBASIC2.9□□□□□ -1.95
CD74P04233 MTCO1P49-201ENST00000523429 802 ntBASIC2.9□□□□□ -1.95
CD74P04233 C1DP5-201ENST00000525775 383 ntBASIC2.9□□□□□ -1.95
CD74P04233 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.9□□□□□ -1.95
CD74P04233 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.9□□□□□ -1.95
CD74P04233 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.9□□□□□ -1.95
CD74P04233 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.9□□□□□ -1.95
CD74P04233 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.9□□□□□ -1.95
CD74P04233 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.9□□□□□ -1.95
CD74P04233 AC087499.8-201ENST00000578406 226 ntBASIC2.9□□□□□ -1.95
CD74P04233 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.9□□□□□ -1.95
CD74P04233 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.9□□□□□ -1.95
CD74P04233 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.9□□□□□ -1.95
CD74P04233 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.9□□□□□ -1.95
CD74P04233 U1.23-201ENST00000610293 146 ntBASIC2.9□□□□□ -1.95
CD74P04233 AC005344.1-201ENST00000613391 459 ntBASIC2.9□□□□□ -1.95
CD74P04233 RNU1-68P-201ENST00000615382 146 ntBASIC2.9□□□□□ -1.95
CD74P04233 AC073569.3-201ENST00000619055 682 ntBASIC2.9□□□□□ -1.95
CD74P04233 U1.39-201ENST00000621562 146 ntBASIC2.9□□□□□ -1.95
CD74P04233 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.9□□□□□ -1.95
CD74P04233 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.9□□□□□ -1.95
CD74P04233 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CD74P04233 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.9□□□□□ -1.95
CD74P04233 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.95
CD74P04233 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CD74P04233 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.89□□□□□ -1.95
CD74P04233 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 FRG1CP-201ENST00000358464 769 ntBASIC2.89□□□□□ -1.95
CD74P04233 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CD74P04233 RNU6-1293P-201ENST00000384077 107 ntBASIC2.89□□□□□ -1.95
CD74P04233 RPL32P23-201ENST00000397237 405 ntBASIC2.89□□□□□ -1.95
CD74P04233 ATP5F1P6-201ENST00000402768 767 ntBASIC2.89□□□□□ -1.95
CD74P04233 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.89□□□□□ -1.95
CD74P04233 RSL24D1P1-201ENST00000404972 493 ntBASIC2.89□□□□□ -1.95
CD74P04233 HMGB3P31-201ENST00000413333 595 ntBASIC2.89□□□□□ -1.95
CD74P04233 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.89□□□□□ -1.95
CD74P04233 AC005517.2-201ENST00000424673 553 ntBASIC2.89□□□□□ -1.95
CD74P04233 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.89□□□□□ -1.95
CD74P04233 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.89□□□□□ -1.95
CD74P04233 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 UBE2V1P1-201ENST00000430836 445 ntBASIC2.89□□□□□ -1.95
CD74P04233 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 MTND5P28-201ENST00000438005 1594 ntBASIC2.89□□□□□ -1.95
CD74P04233 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.89□□□□□ -1.95
CD74P04233 TRIM60P18-201ENST00000441518 828 ntBASIC2.89□□□□□ -1.95
CD74P04233 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 AC068135.1-201ENST00000446164 246 ntBASIC2.89□□□□□ -1.95
CD74P04233 AC126121.1-201ENST00000482313 553 ntBASIC2.89□□□□□ -1.95
CD74P04233 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.89□□□□□ -1.95
CD74P04233 AC093278.1-201ENST00000494700 600 ntBASIC2.89□□□□□ -1.95
CD74P04233 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.89□□□□□ -1.95
CD74P04233 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.89□□□□□ -1.95
CD74P04233 POU5F1P7-201ENST00000508759 541 ntBASIC2.89□□□□□ -1.95
CD74P04233 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.89□□□□□ -1.95
CD74P04233 HIGD1AP3-201ENST00000515857 278 ntBASIC2.89□□□□□ -1.95
CD74P04233 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.89□□□□□ -1.95
CD74P04233 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.89□□□□□ -1.95
CD74P04233 AC083923.1-201ENST00000523708 376 ntBASIC2.89□□□□□ -1.95
CD74P04233 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.89□□□□□ -1.95
CD74P04233 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CD74P04233 SERPINE4P-201ENST00000554978 281 ntBASIC2.89□□□□□ -1.95
CD74P04233 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.89□□□□□ -1.95
CD74P04233 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.89□□□□□ -1.95
CD74P04233 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.89□□□□□ -1.95
CD74P04233 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.89□□□□□ -1.95
CD74P04233 AC006130.2-201ENST00000586202 326 ntBASIC2.89□□□□□ -1.95
CD74P04233 AC067852.3-201ENST00000589177 561 ntBASIC2.89□□□□□ -1.95
CD74P04233 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.89□□□□□ -1.95
CD74P04233 AC005776.1-201ENST00000603164 290 ntBASIC2.89□□□□□ -1.95
CD74P04233 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
CD74P04233 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 RNU6-156P-201ENST00000621869 107 ntBASIC2.89□□□□□ -1.95
CD74P04233 AC024595.1-201ENST00000623088 387 ntBASIC2.89□□□□□ -1.95
CD74P04233 AC097460.3-201ENST00000623099 442 ntBASIC2.89□□□□□ -1.95
CD74P04233 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 AP004289.2-201ENST00000444413 1457 ntBASIC2.89□□□□□ -1.95
CD74P04233 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.89□□□□□ -1.95
CD74P04233 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD74P04233 AC103988.1-201ENST00000566382 2177 ntBASIC2.88□□□□□ -1.95
CD74P04233 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CD74P04233 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CD74P04233 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms