Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
UBE4BO95155 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBE4BO95155 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE4BO95155 RNU6-354P-201ENST00000383862 107 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 RNU6-610P-201ENST00000384264 107 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.83□□□□□ -1.8
UBE4BO95155 RSL24D1P1-201ENST00000404972 493 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE4BO95155 AC017079.2-201ENST00000416102 485 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 AL158071.1-201ENST00000430315 461 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 AL512637.2-201ENST00000431287 1256 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 AC092641.1-201ENST00000440229 772 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE4BO95155 FTH1P25-201ENST00000447665 469 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE4BO95155 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE4BO95155 RBMY2UP-201ENST00000453474 324 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 NAP1L1P3-201ENST00000462291 880 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE4BO95155 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.83□□□□□ -1.8
UBE4BO95155 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.83□□□□□ -1.8
UBE4BO95155 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.83□□□□□ -1.8
UBE4BO95155 AC119751.1-201ENST00000513357 765 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.83□□□□□ -1.8
UBE4BO95155 RNU2-58P-201ENST00000516403 183 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 SNORA70.19-201ENST00000516717 90 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.83□□□□□ -1.8
UBE4BO95155 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE4BO95155 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.83□□□□□ -1.8
UBE4BO95155 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE4BO95155 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.83□□□□□ -1.8
UBE4BO95155 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.83□□□□□ -1.8
UBE4BO95155 AC006270.2-201ENST00000578523 652 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 OR4G1P-201ENST00000588632 938 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 AP004247.3-201ENST00000608682 624 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.83□□□□□ -1.8
UBE4BO95155 U4.6-201ENST00000621618 127 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
UBE4BO95155 PABPC1P7-201ENST00000413177 1513 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBE4BO95155 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBE4BO95155 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBE4BO95155 PRO1804-201ENST00000623780 2050 ntBASIC3.83□□□□□ -1.8
UBE4BO95155 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
UBE4BO95155 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBE4BO95155 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
UBE4BO95155 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE4BO95155 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE4BO95155 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
UBE4BO95155 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
UBE4BO95155 RNU6-932P-201ENST00000391108 106 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE4BO95155 TMSB4XP8-201ENST00000402089 135 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 OR51A3P-201ENST00000413596 924 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 TMSB4XP6-201ENST00000415187 135 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 MTCYBP24-201ENST00000420387 1106 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.82□□□□□ -1.8
UBE4BO95155 TMSB4XP1-201ENST00000424567 135 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE4BO95155 AC096632.1-201ENST00000427395 310 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 AP000907.1-201ENST00000428428 510 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 ATP5JP1-201ENST00000431631 322 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 AL592437.1-201ENST00000443781 492 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE4BO95155 AC017099.1-201ENST00000448261 1028 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 AC104978.1-201ENST00000449387 391 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 RPS17P11-201ENST00000474297 293 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE4BO95155 TMEM248P1-201ENST00000510579 951 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 HMGN1P15-201ENST00000513870 295 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE4BO95155 IGKV2D-19-201ENST00000523346 262 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE4BO95155 AL139174.1-201ENST00000531489 886 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 AP004242.1-201ENST00000533701 349 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE4BO95155 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE4BO95155 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE4BO95155 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE4BO95155 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE4BO95155 MIR3200-201ENST00000580767 85 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 AL158211.2-201ENST00000607282 395 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 AC096577.2-201ENST00000611455 153 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 AC019176.2-201ENST00000611579 315 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 AL034408.1-202ENST00000636088 415 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 PWAR6-201ENST00000552334 4618 ntBASIC3.82□□□□□ -1.8
UBE4BO95155 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE4BO95155 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE4BO95155 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.81□□□□□ -1.8
UBE4BO95155 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBE4BO95155 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.81□□□□□ -1.8
UBE4BO95155 RNU6-441P-201ENST00000384545 106 ntBASIC3.81□□□□□ -1.8
UBE4BO95155 RPL31P2-201ENST00000413849 377 ntBASIC3.81□□□□□ -1.8
UBE4BO95155 AC019070.1-201ENST00000415008 1024 ntBASIC3.81□□□□□ -1.8
UBE4BO95155 RPS3AP9-201ENST00000417027 792 ntBASIC3.81□□□□□ -1.8
UBE4BO95155 AC127526.1-201ENST00000417526 366 ntBASIC3.81□□□□□ -1.8
UBE4BO95155 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.81□□□□□ -1.8
UBE4BO95155 RPL21P23-201ENST00000446654 460 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms