Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AL049634.3-201ENST00000604968 457 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.93□□□□□ -1.46
GRIN3BO60391 MIR6133-201ENST00000617057 108 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 AC244100.1-202ENST00000621554 382 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 AC091953.5-201ENST00000622919 233 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.93□□□□□ -1.46
GRIN3BO60391 MIR1321-201ENST00000637766 79 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.93□□□□□ -1.46
GRIN3BO60391 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GRIN3BO60391 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GRIN3BO60391 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.93□□□□□ -1.46
GRIN3BO60391 AC106871.1-201ENST00000568324 3102 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GRIN3BO60391 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GRIN3BO60391 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GRIN3BO60391 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.93□□□□□ -1.46
GRIN3BO60391 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
GRIN3BO60391 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.92□□□□□ -1.46
GRIN3BO60391 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.92□□□□□ -1.46
GRIN3BO60391 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
GRIN3BO60391 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 OR51H2P-202ENST00000641424 3046 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 Y_RNA.89-201ENST00000363031 102 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 U8.3-201ENST00000363321 132 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.92□□□□□ -1.46
GRIN3BO60391 RNU6-876P-201ENST00000391295 104 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 PRRC2CP1-201ENST00000404428 159 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AL078604.1-201ENST00000404609 466 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AL358934.1-201ENST00000432346 324 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AC023347.2-201ENST00000433994 462 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 USP9YP8-201ENST00000441913 500 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 BTF3P5-201ENST00000457252 467 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 MTCO1P42-201ENST00000457379 726 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AC087312.1-201ENST00000471411 480 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AC010301.1-201ENST00000473936 355 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AC008628.2-201ENST00000502605 298 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.92□□□□□ -1.46
GRIN3BO60391 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.92□□□□□ -1.46
GRIN3BO60391 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 SOD1P3-201ENST00000518682 454 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.92□□□□□ -1.46
GRIN3BO60391 FAM92A1P1-201ENST00000528023 890 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.92□□□□□ -1.46
GRIN3BO60391 AC060780.3-201ENST00000589464 80 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 AC245014.2-201ENST00000603689 287 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AC246785.4-201ENST00000605374 287 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AC018695.5-201ENST00000605872 315 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AC010424.2-201ENST00000607594 443 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AL139124.1-201ENST00000609123 421 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.92□□□□□ -1.46
GRIN3BO60391 SNX18P1Y-201ENST00000616231 511 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 AC110994.2-201ENST00000635481 492 ntBASIC5.92□□□□□ -1.46
GRIN3BO60391 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
GRIN3BO60391 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
GRIN3BO60391 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
GRIN3BO60391 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GRIN3BO60391 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GRIN3BO60391 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 MAPK10-338ENST00000641647 3362 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GRIN3BO60391 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
GRIN3BO60391 RNU4-76P-201ENST00000364509 141 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.91□□□□□ -1.46
GRIN3BO60391 MIR200C-201ENST00000384980 68 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 RNU6-780P-201ENST00000391030 104 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 RN7SKP267-201ENST00000410381 285 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 RPL23AP26-201ENST00000412728 464 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GRIN3BO60391 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.91□□□□□ -1.46
GRIN3BO60391 SPA17P1-201ENST00000416656 452 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.91□□□□□ -1.46
GRIN3BO60391 BX295541.1-201ENST00000417774 250 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 AC009238.2-201ENST00000431026 355 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 NPM1P18-201ENST00000434232 732 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 RSU1P2-202ENST00000437884 485 ntBASIC5.91□□□□□ -1.46
GRIN3BO60391 AC079448.1-201ENST00000449377 373 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms