Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 DPPA2P1-201ENST00000428060 556 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 AL139415.2-201ENST00000431968 163 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 RBMX2P4-201ENST00000441256 376 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC005002.1-201ENST00000447458 540 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.27□□□□□ -1.73
SMAD6O43541 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.27□□□□□ -1.73
SMAD6O43541 SNRPGP5-201ENST00000456003 220 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.27□□□□□ -1.73
SMAD6O43541 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.27□□□□□ -1.73
SMAD6O43541 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 WBP1LP4-201ENST00000505043 344 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.27□□□□□ -1.73
SMAD6O43541 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC010285.3-201ENST00000511668 676 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC023632.1-201ENST00000518463 375 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 DUXAP2-201ENST00000519198 589 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
SMAD6O43541 PHBP17-201ENST00000528576 541 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC100770.1-201ENST00000532310 322 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMAD6O43541 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC136619.2-201ENST00000563361 631 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 MTCO3P24-201ENST00000572729 782 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMAD6O43541 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.27□□□□□ -1.73
SMAD6O43541 BNIP3P26-201ENST00000600827 554 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AP000403.1-201ENST00000603349 851 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 MTCYBP22-201ENST00000603788 447 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AC126118.1-201ENST00000607744 628 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AC099676.1-201ENST00000608886 657 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 Z99129.1-201ENST00000612510 255 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 RNA5SP196-201ENST00000625967 102 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AC087821.2-201ENST00000637086 450 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMAD6O43541 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMAD6O43541 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.27□□□□□ -1.73
SMAD6O43541 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC010300.1-201ENST00000600671 5134 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC025125.1-201ENST00000624743 1922 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AC026951.1-201ENST00000559530 2459 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SMAD6O43541 AC011477.1-204ENST00000623416 1325 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.26□□□□□ -1.73
SMAD6O43541 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SMAD6O43541 RNU1-13P-201ENST00000384499 162 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 OR8G2P-201ENST00000412796 908 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.26□□□□□ -1.73
SMAD6O43541 RPS12P23-201ENST00000419579 400 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.26□□□□□ -1.73
SMAD6O43541 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.26□□□□□ -1.73
SMAD6O43541 GTF2IP23-201ENST00000423746 351 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 AC234064.1-201ENST00000436312 247 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.26□□□□□ -1.73
SMAD6O43541 USP9YP29-201ENST00000445112 563 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.26□□□□□ -1.73
SMAD6O43541 AC114755.5-201ENST00000447760 831 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 AC027673.1-201ENST00000456245 405 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.26□□□□□ -1.73
SMAD6O43541 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SMAD6O43541 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.26□□□□□ -1.73
SMAD6O43541 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.26□□□□□ -1.73
SMAD6O43541 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.26□□□□□ -1.73
SMAD6O43541 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 AC108120.2-201ENST00000512973 294 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.26□□□□□ -1.73
SMAD6O43541 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.26□□□□□ -1.73
SMAD6O43541 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.26□□□□□ -1.73
SMAD6O43541 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.26□□□□□ -1.73
SMAD6O43541 AC092747.2-201ENST00000545069 983 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
SMAD6O43541 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.26□□□□□ -1.73
SMAD6O43541 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.26□□□□□ -1.73
SMAD6O43541 MTND6P33-201ENST00000571794 183 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 AC022655.2-201ENST00000577280 318 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.26□□□□□ -1.73
SMAD6O43541 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
SMAD6O43541 MIR6867-201ENST00000610636 67 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 ZYXP1-201ENST00000617638 118 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 AL008636.1-201ENST00000625038 1018 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 AC055839.1-201ENST00000634467 498 ntBASIC4.26□□□□□ -1.73
SMAD6O43541 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms