Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.59□□□□□ -1.83
SLC28A1O00337 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SLC28A1O00337 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SLC28A1O00337 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.84
SLC28A1O00337 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SLC28A1O00337 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SLC28A1O00337 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.59□□□□□ -1.84
SLC28A1O00337 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SLC28A1O00337 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AP005901.5-201ENST00000545779 1796 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.58□□□□□ -1.84
SLC28A1O00337 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC28A1O00337 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC28A1O00337 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SLC28A1O00337 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC28A1O00337 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC28A1O00337 RNU6-989P-201ENST00000362756 107 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 SNORD82-201ENST00000365530 70 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 RNU6-657P-201ENST00000383904 107 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 SNORA51.6-201ENST00000384151 125 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 RPL31P1-201ENST00000398116 372 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AL138880.1-201ENST00000405824 642 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 RNA5SP317-201ENST00000410176 116 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 RNA5SP311-201ENST00000411290 116 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AL807761.1-201ENST00000417622 171 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AL449283.1-202ENST00000418249 604 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 OR8F1P-201ENST00000425243 930 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 OSTCP5-201ENST00000425293 453 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AC017083.1-201ENST00000428093 483 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AC012497.1-201ENST00000429392 575 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.58□□□□□ -1.84
SLC28A1O00337 GTF2IP7-202ENST00000436677 309 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AC127537.2-201ENST00000439258 465 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.58□□□□□ -1.84
SLC28A1O00337 PNPLA4P1-201ENST00000458328 305 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 OR9M1P-201ENST00000459641 921 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 RPL7L1P8-201ENST00000469911 741 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AC092451.1-201ENST00000480211 153 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AC108078.3-201ENST00000502633 489 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC28A1O00337 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC28A1O00337 RNA5SP315-201ENST00000516340 116 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 RNA5SP312-201ENST00000517068 116 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.58□□□□□ -1.84
SLC28A1O00337 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC28A1O00337 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC28A1O00337 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC28A1O00337 OR5D17P-201ENST00000531492 978 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC28A1O00337 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.58□□□□□ -1.84
SLC28A1O00337 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC28A1O00337 AC007687.1-201ENST00000602704 304 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AC069431.2-201ENST00000604149 1099 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AC091946.2-201ENST00000606105 291 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AL139022.2-201ENST00000606934 443 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 PART1_2.1-201ENST00000612397 250 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 AC008083.4-201ENST00000615076 444 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC28A1O00337 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SLC28A1O00337 AL732372.2-225ENST00000642124 456 ntBASIC3.58□□□□□ -1.84
SLC28A1O00337 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC28A1O00337 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
SLC28A1O00337 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC28A1O00337 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC28A1O00337 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SLC28A1O00337 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC28A1O00337 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SLC28A1O00337 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC28A1O00337 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SLC28A1O00337 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SLC28A1O00337 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SLC28A1O00337 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SLC28A1O00337 RNU6-283P-201ENST00000364788 107 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC28A1O00337 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 AL583834.1-201ENST00000406943 343 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 RPL23AP47-201ENST00000408017 460 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC28A1O00337 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC28A1O00337 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC28A1O00337 OR4K6P-201ENST00000416478 897 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 Z75741.2-201ENST00000417272 1167 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC28A1O00337 HSFY1P1-201ENST00000423928 1178 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 AC006548.1-201ENST00000427470 102 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC28A1O00337 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC28A1O00337 MRPS18BP2-201ENST00000434310 759 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 NDUFB1P1-201ENST00000435191 180 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 MTCO1P53-201ENST00000441633 699 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 ELOCP13-201ENST00000443934 329 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 HMGB3P6-201ENST00000444896 598 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 AL358794.1-201ENST00000445689 381 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SLC28A1O00337 PLGLA-201ENST00000465668 449 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 AC007537.2-201ENST00000472093 511 ntBASIC3.57□□□□□ -1.84
SLC28A1O00337 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms