Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC069213.2-201ENST00000420238 366 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 RPL34P26-201ENST00000445636 354 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC105137.1-201ENST00000484355 562 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC090543.1-201ENST00000492168 485 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC104109.1-201ENST00000498563 436 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 NPM1P41-201ENST00000512920 831 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 IGKV3OR22-2-201ENST00000517943 313 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AP003717.3-201ENST00000544832 1180 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC007115.1-201ENST00000546853 234 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC093014.1-201ENST00000548926 724 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC034105.3-201ENST00000565294 442 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR5187-201ENST00000583479 76 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC008739.2-201ENST00000597006 317 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC024153.1-201ENST00000603103 365 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AL160237.3-201ENST00000604114 1013 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AL162713.1-201ENST00000604480 262 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 ARF4P1-201ENST00000605447 541 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 ACTR3BP1-201ENST00000605584 1247 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR6780B-201ENST00000610307 79 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AL161616.1-201ENST00000611867 286 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC105227.2-201ENST00000615075 605 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AC010338.1-201ENST00000621823 717 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 C4BPAP1-201ENST00000415474 1893 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AL512646.1-201ENST00000269395 1077 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AL596028.1-201ENST00000326971 197 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 RN7SKP15-201ENST00000364742 309 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 RNA5SP498-201ENST00000411342 120 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 RPS7P15-201ENST00000415804 584 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 BX510359.3-201ENST00000422168 306 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 GCA-203ENST00000429691 824 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AL606490.7-201ENST00000433136 191 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 ST13P20-201ENST00000447996 1065 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC073264.2-201ENST00000448886 166 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 RPS29P2-201ENST00000479278 136 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC007686.1-201ENST00000488511 463 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 SNORA31.9-201ENST00000516429 84 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 SNORA31.20-201ENST00000517111 133 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 LECT2-205ENST00000522943 574 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 MTCO1P47-201ENST00000523889 1271 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC121758.2-201ENST00000553271 193 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR3614-201ENST00000581261 86 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR4436B2-201ENST00000581415 91 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR4436B1-201ENST00000583272 91 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC092474.3-201ENST00000603022 568 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC010591.1-201ENST00000603941 649 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC009570.1-201ENST00000609599 745 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 BX664608.1-201ENST00000610519 487 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 U73479.1-201ENST00000618062 168 ntBASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 AC009039.2-201ENST00000624524 529 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms