Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 RNU6-415P-201ENST00000516252 97 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 DEFB130C-202ENST00000530001 230 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC017100.2-201ENST00000584628 355 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AL161756.2-201ENST00000604597 246 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC112220.2-201ENST00000605513 533 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AL365400.2-201ENST00000605604 902 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AP000238.1-201ENST00000608759 426 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AL359535.1-201ENST00000612100 1087 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 MIR486-1-201ENST00000612171 68 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC022960.3-201ENST00000619794 441 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 U4.6-201ENST00000621618 127 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC007656.2-201ENST00000624902 4547 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 MTCO2P31-201ENST00000402702 684 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 MTCO2P23-201ENST00000425216 680 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 OSTCP5-201ENST00000425293 453 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC017083.1-201ENST00000428093 483 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 GTF2IP3-201ENST00000433887 494 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 RPL23AP83-201ENST00000434984 473 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 YWHAZP8-201ENST00000436935 731 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 EXOSC3P1-201ENST00000448649 500 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 RPL7P31-201ENST00000450192 724 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 ANP32BP2-201ENST00000454525 545 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 UBE2V1P12-201ENST00000503954 474 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 TPT1P8-201ENST00000510120 555 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 OR5H4P-201ENST00000510851 923 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 RPL7L1P13-201ENST00000511702 739 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC010342.1-201ENST00000514047 877 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 RN7SKP96-201ENST00000516948 297 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC067852.4-201ENST00000590314 478 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC006077.1-201ENST00000604746 343 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC113194.1-201ENST00000606037 500 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AL583856.2-201ENST00000606298 543 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AP005137.2-201ENST00000609238 400 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 MIR6864-201ENST00000617935 70 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AL713922.2-201ENST00000619384 716 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 AC123767.1-202ENST00000620407 817 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 XPOTP1-201ENST00000443317 2398 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 OTUD4P1-201ENST00000237841 3067 ntBASIC3.67□□□□□ -1.82
NEDD8-MDP1E9PL57 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 MTND5P1-201ENST00000445440 1375 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 MAPK10-373ENST00000641983 6772 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 Z98941.1-201ENST00000407764 100 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 MTCO2P8-201ENST00000412213 658 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AL449283.1-202ENST00000418249 604 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC106883.1-201ENST00000418805 562 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC009237.2-201ENST00000421358 284 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 ATP5JP1-201ENST00000431631 322 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AL645638.1-201ENST00000440519 361 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms