Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 BTF3P5-201ENST00000457252 467 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AL024509.2-201ENST00000493462 493 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 MTND5P13-201ENST00000513046 1079 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 Vault.1-201ENST00000516474 102 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 HIGD1AP5-201ENST00000529959 259 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC105129.1-201ENST00000560250 297 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AL390726.5-202ENST00000564800 256 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC091489.2-201ENST00000566263 604 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC015726.1-201ENST00000602353 681 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AP000403.1-201ENST00000603349 851 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC135507.1-201ENST00000607214 561 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AL158063.1-201ENST00000615349 536 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC018755.4-201ENST00000619715 454 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 DHX40P1-201ENST00000588725 1412 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AL049780.3-201ENST00000624612 1583 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 OR4K15-201ENST00000305051 1216 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 OR11H4-201ENST00000315409 1082 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 RNU6-853P-201ENST00000364306 107 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 RNU6-769P-201ENST00000384407 104 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 RPS3AP23-201ENST00000401762 784 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 RN7SKP182-201ENST00000410772 298 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 RPL17P12-201ENST00000413391 526 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC140479.3-201ENST00000418944 1126 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC244098.2-201ENST00000422068 99 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC092832.1-201ENST00000422934 400 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AL513174.1-201ENST00000423182 629 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC016712.1-201ENST00000431088 378 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 CDC27P1-201ENST00000445384 715 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AL353691.1-201ENST00000451332 387 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC073387.1-201ENST00000453261 709 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 HMGB3P30-201ENST00000457863 606 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC111000.3-201ENST00000508057 576 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC068790.4-201ENST00000602474 263 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 U73023.1-201ENST00000603134 700 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 AC021755.1-201ENST00000559747 1447 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 MAPK10-320ENST00000641462 6696 ntBASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A3BPQ9Y5P4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 RNU4-21P-201ENST00000362802 126 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 RNU5F-6P-201ENST00000362979 116 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 SNORD113.2-201ENST00000364166 89 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AL049693.1-201ENST00000402760 611 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms