Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU6-216P-201ENST00000363282 104 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 RNU1-83P-201ENST00000363426 164 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 RNU6-1122P-201ENST00000384449 107 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 MIR506-201ENST00000384998 124 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 SNORD96B-201ENST00000386148 79 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 RPL23AP26-201ENST00000412728 464 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 MTCYBP38-201ENST00000417160 1123 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 OR5BE1P-201ENST00000425977 939 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AL132765.1-201ENST00000434165 553 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 RPS24P1-201ENST00000438550 371 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 MTND2P20-201ENST00000440805 661 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 TRIM60P18-201ENST00000441518 828 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 MTCO2P3-201ENST00000442543 421 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 RAB11AP1-201ENST00000442978 646 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC105137.1-201ENST00000484355 562 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC108078.3-201ENST00000502633 489 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC079140.3-201ENST00000511111 550 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 RNU6-488P-201ENST00000515918 99 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 RNY4P37-201ENST00000516225 96 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 RNU6-347P-201ENST00000516658 105 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC008802.1-201ENST00000519121 791 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC239860.2-201ENST00000525886 270 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC017100.2-201ENST00000584628 355 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC093227.2-201ENST00000589357 285 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC083899.3-201ENST00000603413 594 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC069304.2-201ENST00000605154 435 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC010857.1-201ENST00000606398 594 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AL355816.1-201ENST00000607951 118 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC116447.1-201ENST00000613153 453 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC100793.4-201ENST00000613683 429 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC005086.4-201ENST00000623065 213 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC116563.2-201ENST00000624751 535 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 MIR3653-201ENST00000625572 110 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC092192.1-201ENST00000633154 1018 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 OR5BE1P-202ENST00000641168 1176 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 EOGT-210ENST00000615922 1931 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AL356473.1-201ENST00000406203 1408 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 LINC00622-201ENST00000562811 1570 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC009229.4-201ENST00000623854 1947 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 PNPT1P2-201ENST00000456768 2050 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 RPL21P132-201ENST00000331267 462 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 RNA5SP388-201ENST00000362584 119 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 RNU4-91P-201ENST00000364778 135 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 RNU2-16P-201ENST00000410712 136 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AF274854.1-201ENST00000413236 615 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 CYCSP46-201ENST00000423569 204 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 UBE2FP3-201ENST00000436366 524 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 CDC27P1-201ENST00000445384 715 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 RPL23AP43-201ENST00000446445 471 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC012671.1-201ENST00000451912 203 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 USP9YP10-201ENST00000454868 628 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 CFTRP1-201ENST00000456646 183 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC090013.1-201ENST00000485147 480 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC093824.1-201ENST00000508796 343 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 USP9YP5-201ENST00000511770 630 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 ARL2BPP5-201ENST00000523141 481 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AP003730.1-201ENST00000524605 285 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC027807.1-201ENST00000559921 996 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC113403.1-201ENST00000604910 193 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC068276.1-201ENST00000605793 379 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AC092354.2-201ENST00000607786 514 ntBASIC4.78□□□□□ -1.64
SSX2IPQ9Y2D8 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms