Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RN7SKP53-201ENST00000411337 315 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 MTND4P22-201ENST00000413116 1169 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC012498.1-201ENST00000424037 437 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 ISCA1P2-201ENST00000438679 421 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC092170.1-201ENST00000440211 356 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 CFTRP1-201ENST00000456646 183 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC073522.1-201ENST00000483312 377 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC104629.1-201ENST00000494226 508 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC104108.1-201ENST00000509930 412 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC023141.12-201ENST00000512399 199 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 RNU5A-7P-201ENST00000515979 116 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC026403.1-201ENST00000518938 295 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AP003355.1-201ENST00000518956 587 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 MED28P5-201ENST00000528254 438 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC026333.2-201ENST00000542164 106 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 DUXAP6-201ENST00000553858 601 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC034105.4-201ENST00000568304 277 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AL392112.1-201ENST00000605115 829 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AL034408.1-202ENST00000636088 415 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 MIR4278-201ENST00000636094 69 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 MFSD8-236ENST00000641509 4050 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AC004972.1-201ENST00000623934 2209 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 ZNF33CP-201ENST00000432492 2030 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 AL365440.1-201ENST00000436135 2167 ntBASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TRAPPC4Q9Y296 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 MTCO1P6-201ENST00000481192 1384 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC000367.1-201ENST00000452711 1766 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 RNU6-207P-201ENST00000384137 107 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 MIR200C-201ENST00000384980 68 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AL035405.1-201ENST00000400795 710 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 RN7SKP111-201ENST00000410349 271 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 DEFB130D-201ENST00000426866 237 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 FO393414.1-201ENST00000428697 1184 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 HSPD1P21-201ENST00000436541 245 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 MTCYBP31-201ENST00000438855 1122 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC122718.1-201ENST00000439448 744 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AL357552.1-201ENST00000445254 415 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 RBMY2UP-201ENST00000453474 324 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 FAM133DP-201ENST00000464802 691 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 RPL21P18-201ENST00000469899 480 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC078785.3-201ENST00000476607 425 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 RPS4XP6-201ENST00000477670 797 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC126121.1-201ENST00000482313 553 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC008885.2-201ENST00000509506 930 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC104619.4-201ENST00000510773 249 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC112198.4-201ENST00000515450 351 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC103843.2-201ENST00000530523 682 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC011611.5-201ENST00000552477 578 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 VN1R88P-201ENST00000596787 292 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AP002906.1-201ENST00000603405 233 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 BNIP3P4-201ENST00000604946 565 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC078880.5-201ENST00000617845 421 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AL590396.2-201ENST00000636511 1041 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC244258.1-201ENST00000637553 1071 ntBASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TRAPPC4Q9Y296 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms