Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 RN7SKP159-201ENST00000410657 292 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 RNA5SP31-201ENST00000411144 127 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 HMGB3P23-201ENST00000414981 585 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AL357078.2-201ENST00000416486 427 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 GLRXP1-201ENST00000423261 334 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 RPL21P112-201ENST00000434403 463 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AL645931.1-201ENST00000439737 410 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 MTND2P30-201ENST00000456663 382 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 snoU13.3-201ENST00000459441 104 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AC108941.1-201ENST00000502853 530 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 CR383656.14-201ENST00000551951 406 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 GTF2IP22-201ENST00000554443 182 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 MIR4506-201ENST00000584693 77 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AL671309.1-201ENST00000603750 544 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AC009948.4-201ENST00000604692 675 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AC021851.1-201ENST00000608537 1082 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 RMST_10.1-201ENST00000616309 154 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 U73479.1-201ENST00000618062 168 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AC244100.1-202ENST00000621554 382 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AC004777.1-201ENST00000624317 287 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AC048347.1-201ENST00000624621 427 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AL590396.2-201ENST00000636511 1041 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 AC119674.1-207ENST00000641355 633 ntBASIC3.12□□□□□ -1.91
DUX4Q9UBX2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DUX4Q9UBX2 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AL158050.1-201ENST00000416077 457 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 OFD1P18Y-201ENST00000420889 959 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 RPL36P19-201ENST00000430744 301 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 RAB11AP1-201ENST00000442978 646 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AC099563.1-201ENST00000456086 418 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 RPS15AP1-201ENST00000457423 391 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AL133162.1-201ENST00000463228 453 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 HMGB1P38-201ENST00000490557 577 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AC104057.1-201ENST00000515547 497 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 IGKV2D-19-201ENST00000523346 262 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 OR4G1P-201ENST00000588632 938 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 BNIP3P38-201ENST00000601117 544 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 IGHV3-29-201ENST00000604817 344 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AC090425.2-201ENST00000608818 501 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AL354696.1-201ENST00000614652 497 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 AC068620.4-201ENST00000636730 1182 ntBASIC3.11□□□□□ -1.91
DUX4Q9UBX2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DUX4Q9UBX2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
DUX4Q9UBX2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DUX4Q9UBX2 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DUX4Q9UBX2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DUX4Q9UBX2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
DUX4Q9UBX2 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.1□□□□□ -1.91
DUX4Q9UBX2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
DUX4Q9UBX2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
DUX4Q9UBX2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DUX4Q9UBX2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
DUX4Q9UBX2 SNORA51.2-201ENST00000364595 132 ntBASIC3.1□□□□□ -1.91
DUX4Q9UBX2 AC007066.1-201ENST00000392902 381 ntBASIC3.1□□□□□ -1.91
DUX4Q9UBX2 RNU6-77P-201ENST00000410554 91 ntBASIC3.1□□□□□ -1.91
DUX4Q9UBX2 BMS1P22-201ENST00000414726 313 ntBASIC3.1□□□□□ -1.91
DUX4Q9UBX2 SDCBPP3-201ENST00000419629 891 ntBASIC3.1□□□□□ -1.91
DUX4Q9UBX2 AC069157.1-201ENST00000421749 137 ntBASIC3.1□□□□□ -1.91
DUX4Q9UBX2 AL606495.1-201ENST00000422100 813 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms