Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MTND3P1-201ENST00000441336 220 ntBASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 SETD6P1-201ENST00000444575 317 ntBASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AL500522.2-201ENST00000448562 343 ntBASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AC010307.1-201ENST00000467206 836 ntBASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 RPS3AP22-201ENST00000488297 769 ntBASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AC092045.1-201ENST00000495716 1231 ntBASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AC105185.1-201ENST00000518705 535 ntBASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 DUXAP6-201ENST00000553858 601 ntBASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AC009318.3-201ENST00000616916 503 ntBASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AC048344.4-201ENST00000619744 527 ntBASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC6Q9UBN7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AP000776.1-201ENST00000530032 1663 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC109315.1-201ENST00000584143 1347 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 RNU6-213P-201ENST00000384051 104 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 JKAMPP1-201ENST00000413804 919 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 RBMY1KP-201ENST00000423480 476 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC006946.1-201ENST00000429106 328 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC018644.1-201ENST00000429934 551 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AL513175.1-201ENST00000431492 780 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 YWHAZP7-201ENST00000436906 631 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 NDUFA5P7-201ENST00000452914 242 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 RPL7P18-201ENST00000478965 734 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 ACTG1P13-201ENST00000486987 1043 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC093534.1-201ENST00000504977 132 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 MTND1P22-201ENST00000510572 951 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 KRT19P6-201ENST00000510983 209 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC027309.2-201ENST00000520566 192 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 OSBPL9P5-201ENST00000542581 171 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC005255.1-201ENST00000593748 216 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AL592221.1-201ENST00000605266 382 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 MIR6868-201ENST00000611215 58 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AL450489.1-201ENST00000612071 468 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC069209.1-201ENST00000619282 651 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 MIR6075-201ENST00000620782 95 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AL354798.1-201ENST00000622505 329 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC012442.3-202ENST00000636742 206 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 MKKS-204ENST00000639674 192 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC095050.2-201ENST00000510748 1458 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 AC097504.1-201ENST00000515103 2415 ntBASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC6Q9UBN7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC6Q9UBN7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms